RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 HSD17B11Q8NBQ5 300 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 CHST4Q8NCG5 386 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 BHLHE23Q8NDY6 225 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 PLPP5Q8NEB5 264 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR10AD1Q8NGE0 317 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR10D4PQ8NGN7 298 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR13G1Q8NGZ3 307 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 KCNG3Q8TAE7 436 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 FLVCR1-AS1Q8TAF5 88 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 CD300LFQ8TDQ1 290 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 ST7LQ8TDW4 575 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 Q8WTZ3 238 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 RERGQ96A58 199 aaPredicted RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 FGGYQ96C11 551 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 NTNG2Q96CW9 530 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 RAB39BQ96DA2 213 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 TVP23CQ96ET8 276 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 IMMP1LQ96LU5 166 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 PACRGQ96M98 296 aaPredicted RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 MOGAT1Q96PD6 335 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR2A5Q96R48 311 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 NIPSNAP3BQ9BS92 247 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 RTBDNQ9BSG5 229 aaPredicted RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 SOX7Q9BT81 388 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 URM1Q9BTM9 101 aaKnown RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 ABHD6Q9BV23 337 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 TMEM59Q9BXS4 323 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 ACTR3CQ9C0K3 210 aaPredicted RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 EIF5A2Q9GZV4 153 aaKnown RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 SLC25A31Q9H0C2 315 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 METTL9Q9H1A3 318 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 LPAR5Q9H1C0 372 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 CNTD2Q9H8S5 307 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 G6PC2Q9NQR9 355 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 TMEM242Q9NWH2 141 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 MRPL22Q9NWU5 206 aaKnown RBP3.55□□□□□ -1.84
LIG3-211ENST00000588713 SPRR3Q9UBC9 169 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 OR52A1Q9UKL2 312 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 ZDHHC8Q9ULC8 765 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 B9D1Q9UPM9 204 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 SLC22A13Q9Y226 551 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 CADP27708 2225 aa3.55□□□□□ -1.84
LIG3-211ENST00000588713 MALRD1Q5VYJ5 2156 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 TRBV24-1A0A075B6N3 115 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 LOC102723996A0A087X1L8 192 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 A0A0A6YYD4 124 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 KIR2DL5BA0A0G2JN68 375 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 KIR2DL5BA0A0G2JPC4 375 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 A0A0J9YY10 115 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 A0A1W2PQD3 144 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 FOXI3A8MTJ6 420 aaPredicted RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 SERPINE3A8MV23 424 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 PPP5D1E7EU14 171 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 G3V3Y1 287 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 H3BQ15 152 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 M0QZ24 198 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 SCDO00767 359 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 AQP7O14520 342 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 TCAPO15273 167 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 CDC14BO60729 498 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 DFFBO76075 338 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 IL33O95760 270 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 CYB5R3P00387 301 aaPredicted RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 HLA-DQA2P01906 255 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 MBPP02686 304 aaPredicted RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 PRH1P02810 166 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 SFTPBP07988 381 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 SRP19P09132 144 aaKnown RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 CXCL1P09341 107 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 LINC00614P0C842 121 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 GNB3P16520 340 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 ZNF20P17024 532 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 CCL1P22362 96 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 CTSSP25774 331 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 ADMP35318 185 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 PPP1CCP36873 323 aaKnown RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 ALDH3B1P43353 468 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 GLIPR1P48060 266 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 NPY4RP50391 375 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 TMEM33P57088 247 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 UBE2KP61086 200 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 SRPXP78539 464 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 ID2Q02363 134 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 EGR4Q05215 589 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 FAM27E3Q08E93 113 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 GAGE1Q13065 139 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 OR8G1Q15617 311 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 ODF4Q2M2E3 257 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 BEAN1Q3B7T3 259 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 ACSF3Q4G176 576 aaPredicted RBP3.54□□□□□ -1.84
LIG3-211ENST00000588713 SLC22A6Q4U2R8 563 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 RUSC1-AS1Q66K80 236 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 LANCL3Q6ZV70 420 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 DPPA2Q7Z7J5 298 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 OR4N5Q8IXE1 308 aa3.54□□□□□ -1.84
LIG3-211ENST00000588713 KIR2DL5AQ8N109 375 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms