RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 HSPB11Q9Y547 144 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 MAB21L2Q9Y586 359 aa16.58■□□□□ 0.25
TRIM47-204ENST00000587339 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
TRIM47-204ENST00000587339 TEX36Q5VZQ5 186 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 LAMTOR1Q6IAA8 161 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 FAM185AQ8N0U4 392 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 C1orf87Q8N0U7 546 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 C9orf62Q8N4C0 152 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 GALNT14Q96FL9 552 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 SEC22AQ96IW7 307 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 USP24Q9UPU5 2620 aa16.58■□□□□ 0.24
TRIM47-204ENST00000587339 C5orf51A6NDU8 294 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 HEXAP06865 529 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 IL2RGP31785 369 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 SRSF4Q08170 494 aaKnown RBP16.57■□□□□ 0.24
TRIM47-204ENST00000587339 SWI5Q1ZZU3 235 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 ZNF818PQ6ZRF7 136 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 OR13A1Q8NGR1 328 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 CCL17Q92583 94 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 SDSLQ96GA7 329 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 C13orf42A0A1B0GVH6 325 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 GPR31O00270 319 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 ADAP1O75689 374 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 OR5AC1P0C628 307 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 SNRPD2P62316 118 aaKnown RBP16.57■□□□□ 0.24
TRIM47-204ENST00000587339 GSG1LQ6UXU4 331 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 OR5D13Q8NGL4 314 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 LURAP1Q96LR2 239 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 METTL8Q9H825 291 aaKnown RBP16.57■□□□□ 0.24
TRIM47-204ENST00000587339 RDH8Q9NYR8 311 aa16.57■□□□□ 0.24
TRIM47-204ENST00000587339 DYSFO75923 2080 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 HCFC1P51610 2035 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CD8AP01732 235 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 HBZP02008 142 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 GYPAP02724 150 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CEACAM6P40199 344 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 SP6Q3SY56 376 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 TRAT1Q6PIZ9 186 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CMTM1Q8IZ96 169 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 OR1L1Q8NH94 360 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CNTNAP3BQ96NU0 1288 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 TMEM246Q9BRR3 403 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CNTNAP3Q9BZ76 1288 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 ZNF665Q9H7R5 613 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
TRIM47-204ENST00000587339 ODAMA1E959 279 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 HSD17B6O14756 317 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 MPPED1O15442 326 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 SSTR5P35346 364 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 LUMP51884 338 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-204ENST00000587339 EDDM3BP56851 147 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 FGL1Q08830 312 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 OR10V1Q8NGI7 309 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 VRK1Q99986 396 aaPredicted RBP16.55■□□□□ 0.24
TRIM47-204ENST00000587339 SUCNR1Q9BXA5 334 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 PKDREJQ9NTG1 2253 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 TMEM106BQ9NUM4 274 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 TRAV38-1A0A0B4J264 116 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 TMEM178BH3BS89 294 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 SELLP14151 372 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 P2RX3P56373 397 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 RND3P61587 244 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 ZNF788Q6ZQV5 615 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 LDLRAD3Q86YD5 345 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 ARL11Q969Q4 196 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 CCL13Q99616 98 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 COMMD9Q9P000 198 aa16.55■□□□□ 0.24
TRIM47-204ENST00000587339 RBM7Q9Y580 266 aaKnown RBP16.55■□□□□ 0.24
TRIM47-204ENST00000587339 CACNA1BQ00975 2339 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 CFAP46Q8IYW2 2715 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PPIAL4EA0A075B759 164 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 C3orf85A0A1B0GTC6 90 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 MEX3AA1L020 520 aaKnown RBP16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PPIAL4DF5H284 164 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PHF1O43189 567 aaPredicted RBP16.54■□□□□ 0.24
TRIM47-204ENST00000587339 ATP6V1G1O75348 118 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 HOXB5P09067 269 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PPIAL4FP0DN26 164 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 GZMHP20718 246 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 TMEM187Q14656 261 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 TBC1D26Q86UD7 250 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PPP1R1CQ8WVI7 109 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 NINJ1Q92982 152 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 GAFA1Q96PS6 74 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 DCTN5Q9BTE1 182 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 PPIAL4AQ9Y536 164 aa16.54■□□□□ 0.24
TRIM47-204ENST00000587339 LGALS8O00214 317 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 SPINT2O43291 252 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 S100GP29377 79 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 CYCSP99999 105 aaKnown RBP16.53■□□□□ 0.24
TRIM47-204ENST00000587339 IFITM2Q01629 132 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 LGALSLQ3ZCW2 172 aaPredicted RBP16.53■□□□□ 0.24
TRIM47-204ENST00000587339 LRRC37A5PQ49AS3 106 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 GLYATL2Q8WU03 294 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 FAM234AQ9H0X4 552 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 FXYD6-FXYD2A0A087WZ82 144 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 IGHV1-69-2A0A0G2JMI3 117 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 A0A1B0GW55 424 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 MPTX1A8MV57 137 aa16.53■□□□□ 0.24
TRIM47-204ENST00000587339 DUX4L2P0CJ85 424 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms