RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 OR10V1Q8NGI7 309 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 OR1S1Q8NH92 325 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 PPP1R35Q8TAP8 253 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 GLYATL2Q8WU03 294 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 OR5AC2Q9NZP5 309 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 OR14J1Q9UGF5 321 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 NSG2Q9Y328 171 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 SESN1Q9Y6P5 492 aa9.51□□□□□ -0.89
LIG3-204ENST00000585740 ZGRF1Q86YA3 2104 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 IGLV3-9A0A075B6K5 115 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 hCG_1807616A0A1W2PRN6 198 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 OOEPA6NGQ2 149 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.5□□□□□ -0.89
LIG3-204ENST00000585740 ZNF205O95201 554 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 NMBP08949 121 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 UCP1P25874 307 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 PAX5Q02548 391 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 IGFBP7Q16270 282 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 BEX5Q5H9J7 111 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 PRAMEF6Q5VXH4 476 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 EIF5AL1Q6IS14 154 aaKnown RBP9.5□□□□□ -0.89
LIG3-204ENST00000585740 C20orf204Q6ZNR8 217 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 ZNF818PQ6ZRF7 136 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 LYZL2Q7Z4W2 148 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 OR5D13Q8NGL4 314 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 ANGPTL6Q8NI99 470 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 MSL2Q9HCI7 577 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 FZR1Q9UM11 496 aa9.5□□□□□ -0.89
LIG3-204ENST00000585740 PRR14LQ5THK1 2151 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 IGKV1D-13A0A0B4J2D9 117 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 A0A0G2JNJ9 132 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 RNF212BA8MTL3 300 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 C16orf97H3BN30 126 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 K7EPK0 472 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 HSD17B6O14756 317 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 ST8SIA3O43173 380 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 HSPA12AO43301 675 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 IGKV1-13P0DP09 117 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 RCC1P18754 421 aaPredicted RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 BMP5P22003 454 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 TNFSF4P23510 183 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 SNTB1Q13884 538 aaKnown RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 MSMO1Q15800 293 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 AANATQ16613 207 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 GPR157Q5UAW9 335 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 TMEM268Q5VZI3 342 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 THOC7Q6I9Y2 204 aaKnown RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 ZNF826PQ6ZT77 177 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 FAM71E2Q8N5Q1 922 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 NUP37Q8NFH4 326 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 OR2Z1Q8NG97 314 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 FAM216AQ8WUB2 273 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 LRRC29Q8WV35 223 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 TOLLIPQ9H0E2 274 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 DNTTIP1Q9H147 329 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 Q9UFV3 132 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 DUSP13Q9UII6 198 aa9.49□□□□□ -0.89
LIG3-204ENST00000585740 ERRFI1Q9UJM3 462 aaPredicted RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
LIG3-204ENST00000585740 CLEC18AA5D8T8 446 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 SRRM5B3KS81 715 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 GPR137BO60478 399 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 PGLYRP1O75594 196 aaPredicted RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 SCGB1D2O95969 90 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 GAPDHP04406 335 aaKnown RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 HEXAP06865 529 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 HKR1P10072 659 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 SLC25A6P12236 298 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 PVALBP20472 110 aaPredicted RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 VDAC1P21796 283 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 PTAFRP25105 342 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 F2RP25116 425 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 CD40P25942 277 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 RPL12P30050 165 aaKnown RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 GATA4P43694 442 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 P2RY1P47900 373 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 FAM27E3Q08E93 113 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 GNMTQ14749 295 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 MEX3BQ6ZN04 569 aaKnown RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 HSD17B13Q7Z5P4 300 aaPredicted RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 SLC35G3Q8N808 338 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 CLEC18CQ8NCF0 446 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 OR4D5Q8NGN0 318 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 LHFPL5Q8TAF8 219 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 TMEM171Q8WVE6 324 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 IL1F10Q8WWZ1 152 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 RBPMSQ93062 196 aaKnown RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 ERGIC1Q969X5 290 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 RRNAD1Q96FB5 475 aaKnown RBP9.48□□□□□ -0.89
LIG3-204ENST00000585740 MEGF10Q96KG7 1140 aa9.48□□□□□ -0.89
LIG3-204ENST00000585740 LURAP1Q96LR2 239 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms