RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RDH5Q92781 318 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 RSG1Q9BU20 258 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 TNRC6AQ8NDV7 1962 aaKnown RBP16.25■□□□□ 0.19
SCARF1-206ENST00000573852 HLA-DRB3P79483 266 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 SRYQ05066 204 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 SLC25A24Q6NUK1 477 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 VSIRQ9H7M9 311 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 RPRMQ9NS64 109 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
SCARF1-206ENST00000573852 OR2W1Q9Y3N9 320 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 TRAV1-1A0A0B4J248 108 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 A0A1B0GU03 582 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 DFFBO76075 338 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 IFNA5P01569 189 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 FAM90A2PQ658T7 463 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 SIT1Q9Y3P8 196 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 TRGC2P03986 189 aa16.24■□□□□ 0.19
SCARF1-206ENST00000573852 TRA2AQ13595 282 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCARF1-206ENST00000573852 GAR1Q9NY12 217 aaKnown RBP16.24■□□□□ 0.19
SCARF1-206ENST00000573852 TRAV24A0A0B4J272 114 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 SERPINE2P07093 398 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 JMJD7P0C870 316 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 CD200P41217 278 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 RAB11AP62491 216 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 OR2B11Q5JQS5 317 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 C17orf78Q8N4C9 275 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 OR10J5Q8NHC4 309 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 MRPS18CQ9Y3D5 142 aaKnown RBP16.23■□□□□ 0.19
SCARF1-206ENST00000573852 DMRT1Q9Y5R6 373 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 DOCK10Q96BY6 2186 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 ZFP92A6NM28 416 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 LILRA1O75019 489 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 IGKV1-39P01597 117 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 IGKV1D-39P04432 117 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 ARL16Q0P5N6 197 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF726P1Q15940 193 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 GFI1BQ5VTD9 330 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 H1FOOQ8IZA3 346 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-206ENST00000573852 OR5A2Q8NGI9 324 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 OR10G4Q8NGN3 311 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 APOBEC3DQ96AK3 386 aaPredicted RBP16.23■□□□□ 0.19
SCARF1-206ENST00000573852 RAB40CQ96S21 281 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF665Q9H7R5 613 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 PCSK5Q92824 1860 aa16.23■□□□□ 0.19
SCARF1-206ENST00000573852 IGKV3D-15A0A087WSY6 115 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 PATE3B3GLJ2 98 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 S100A2P29034 98 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 CYB561P49447 251 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 SPINK14Q6IE38 97 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 LCN15Q6UWW0 184 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 SSX7Q7RTT5 188 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 TUSC5Q8IXB3 177 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 PSMF1Q92530 271 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 RIMS4Q9H426 269 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-206ENST00000573852 SS18L1O75177 396 aaPredicted RBP16.22■□□□□ 0.19
SCARF1-206ENST00000573852 IAPPP10997 89 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 GTF3AQ92664 365 aaKnown RBP16.22■□□□□ 0.19
SCARF1-206ENST00000573852 LINC00470Q9BZP3 86 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 OR1A1Q9P1Q5 309 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 CACNG5Q9UF02 275 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 CELSR3Q9NYQ7 3312 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 ARGFXA6NJG6 315 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 CELA3AP09093 270 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 IGFBP7Q16270 282 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 RNASE11Q8TAA1 199 aaKnown RBP16.22■□□□□ 0.19
SCARF1-206ENST00000573852 IL1F10Q8WWZ1 152 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2AAQ96QV6 131 aa16.22■□□□□ 0.19
SCARF1-206ENST00000573852 ESPL1Q14674 2120 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 TRBV6-6A0A0A6YYG2 114 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 TRAV39A0A0B4J263 110 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 CD300LBA8K4G0 201 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 CNOT4O95628 575 aaKnown RBP16.21■□□□□ 0.19
SCARF1-206ENST00000573852 METTL15P1P0C7V9 234 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 SLC25A6P12236 298 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 S100GP29377 79 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 FGF8P55075 233 aaPredicted RBP16.21■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF787Q6DD87 383 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF880Q6PDB4 577 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 OR5P3Q8WZ94 311 aa16.21■□□□□ 0.19
SCARF1-206ENST00000573852 CISD1Q9NZ45 108 aaKnown RBP16.21■□□□□ 0.19
SCARF1-206ENST00000573852 IGLV2-14P01704 120 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 SOD3P08294 240 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 BCL2P10415 239 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 C9orf152Q5JTZ5 239 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 HAPLN4Q86UW8 402 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 OR10D4PQ8NGN7 298 aa16.21■□□□□ 0.18
SCARF1-206ENST00000573852 B4DEV8 164 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 IGHEP01854 428 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 PDZD11Q5EBL8 140 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF525Q8N782 197 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 ZNF383Q8NA42 475 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 SCGB1C1Q8TD33 95 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 ABHD5Q8WTS1 349 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 GPR61Q9BZJ8 451 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 DLL3Q9NYJ7 618 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 CHD3Q12873 2000 aaKnown RBP16.2■□□□□ 0.18
SCARF1-206ENST00000573852 YKT6O15498 198 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 SYNGR2O43760 224 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 OR10V1Q8NGI7 309 aa16.2■□□□□ 0.18
SCARF1-206ENST00000573852 FAM210BQ96KR6 192 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms