RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 FAM216AQ8WUB2 273 aa16.25■□□□□ 0.19
RPAIN-210ENST00000571613 NINJ1Q92982 152 aa16.25■□□□□ 0.19
RPAIN-210ENST00000571613 OR6C3Q9NZP0 311 aa16.25■□□□□ 0.19
RPAIN-210ENST00000571613 C12orf77C9JDV5 145 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 LGALS8O00214 317 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 MST1LQ2TV78 715 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 CR1LQ2VPA4 569 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 LDLRAD3Q86YD5 345 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 LGI3Q8N145 548 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 MUC15Q8N387 334 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 PRR18Q8N4B5 295 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 NEUROG1Q92886 237 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 COL6A6A6NMZ7 2263 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 PKD1L2Q7Z442 2459 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 C13orf42A0A1B0GVH6 325 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 ODAMA1E959 279 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 NKX6-3A6NJ46 265 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 CCSO14618 274 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 RGS13O14921 159 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 OR5AC1P0C628 307 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 CEACAM6P40199 344 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 GLIPR1P48060 266 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 HTD2P86397 168 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 HOXA4Q00056 320 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-210ENST00000571613 TMEM187Q14656 261 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 SWI5Q1ZZU3 235 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 Q5BKY6 102 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 LIAT1Q6ZQX7 453 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 BVESQ8NE79 360 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 ITLN2Q8WWU7 325 aaPredicted RBP16.24■□□□□ 0.19
RPAIN-210ENST00000571613 RDH8Q9NYR8 311 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 MAB21L2Q9Y586 359 aa16.24■□□□□ 0.19
RPAIN-210ENST00000571613 TRAV39A0A0B4J263 110 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 C3orf85A0A1B0GTC6 90 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 HBZP02008 142 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 WNT2P09544 360 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 LOXP28300 417 aaPredicted RBP16.23■□□□□ 0.19
RPAIN-210ENST00000571613 P2RX3P56373 397 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 TMEM65Q6PI78 240 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 ZNF788Q6ZQV5 615 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 ZNF818PQ6ZRF7 136 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 MRGPRDQ8TDS7 321 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 SEC22AQ96IW7 307 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 C2orf50Q96LR7 162 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 PLSCR3Q9NRY6 295 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 OR1A1Q9P1Q5 309 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 BOLA1Q9Y3E2 137 aa16.23■□□□□ 0.19
RPAIN-210ENST00000571613 RBM7Q9Y580 266 aaKnown RBP16.23■□□□□ 0.19
RPAIN-210ENST00000571613 PPIAL4EA0A075B759 164 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 IGKV1D-13A0A0B4J2D9 117 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 PPIAL4DF5H284 164 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 TMEM178BH3BS89 294 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 SIAH2O43255 324 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 PLAUP00749 431 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 PPIAL4FP0DN26 164 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 IGKV1-13P0DP09 117 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 SLC25A4P12235 298 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 EDDM3AQ14507 147 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 MSMO1Q15800 293 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 C5orf24Q7Z6I8 188 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 ZBTB34Q8NCN2 500 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 PPP1R1CQ8WVI7 109 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 ARL11Q969Q4 196 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 CCL28Q9NRJ3 127 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 TMEM106BQ9NUM4 274 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 PPIAL4AQ9Y536 164 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 ICE1Q9Y2F5 2266 aa16.22■□□□□ 0.19
RPAIN-210ENST00000571613 SIGLEC5O15389 551 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 PHF1O43189 567 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-210ENST00000571613 ZG16O60844 167 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 PPOXP50336 477 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 LGALSLQ3ZCW2 172 aaPredicted RBP16.21■□□□□ 0.19
RPAIN-210ENST00000571613 C11orf87Q6NUJ2 197 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 TBC1D26Q86UD7 250 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 ZNRF1Q8ND25 227 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 OR13A1Q8NGR1 328 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 GRPEL2Q8TAA5 225 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 THAP6Q8TBB0 222 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 C14orf79Q96F83 325 aa16.21■□□□□ 0.19
RPAIN-210ENST00000571613 DIDO1Q9BTC0 2240 aaKnown RBP16.21■□□□□ 0.19
RPAIN-210ENST00000571613 DUXBA0A1W2PPF3 345 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 L7N2F9 121 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 HSD17B6O14756 317 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 ADAP1O75689 374 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 TFF1P04155 84 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 HOXB5P09067 269 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 PET100P0DJ07 73 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 PSMB6P28072 239 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 UQCRFS1P47985 274 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 IFITM2Q01629 132 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 FAM201AQ5SY85 155 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 ZCCHC24Q8N2G6 241 aaKnown RBP16.21■□□□□ 0.18
RPAIN-210ENST00000571613 OR1L1Q8NH94 360 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 GLYATL2Q8WU03 294 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 WDR89Q96FK6 387 aaPredicted RBP16.21■□□□□ 0.18
RPAIN-210ENST00000571613 GAFA1Q96PS6 74 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 TMEM222Q9H0R3 208 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 UBE2J1Q9Y385 318 aaPredicted RBP16.21■□□□□ 0.18
RPAIN-210ENST00000571613 TMED3Q9Y3Q3 217 aa16.21■□□□□ 0.18
RPAIN-210ENST00000571613 ZZEF1O43149 2961 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms