RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.68□□□□□ -0.86
GTF3C1-208ENST00000567843 TRAPPC2LQ9UL33 140 aa9.68□□□□□ -0.86
GTF3C1-208ENST00000567843 PEX16Q9Y5Y5 336 aa9.68□□□□□ -0.86
GTF3C1-208ENST00000567843 MCRIP1C9JLW8 97 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 MPIG6BO95866 241 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 RCC1P18754 421 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 FSTP19883 344 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 WNT4P56705 351 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 LOXL3P58215 753 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 NKAPLQ5M9Q1 402 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 FAM27D1Q5T7N8 215 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 OGFRL1Q5TC84 451 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 OR10K2Q6IF99 312 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 LINC00596Q86U02 117 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 OR8H3Q8N146 312 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 GNG12Q9UBI6 72 aa9.67□□□□□ -0.86
GTF3C1-208ENST00000567843 DNAH9Q9NYC9 4486 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 PTGES3LE9PB15 166 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 ORC5O43913 435 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 HBZP02008 142 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 MGMTP16455 207 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 ZNF134P52741 427 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 TAS2R43P59537 309 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 GPR176Q14439 515 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 SLC16A12Q6ZSM3 486 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 LCNL1Q6ZST4 164 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 SLC35E3Q7Z769 313 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 NANOGP1Q8N7R0 232 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 TFAP2CQ92754 450 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 TMED9Q9BVK6 235 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 KCNK15Q9H427 330 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 C8orf4Q9NR00 106 aa9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 CNOT2Q9NZN8 540 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 RCC2Q9P258 522 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-208ENST00000567843 NUDT19A8MXV4 375 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 SPINT2O43291 252 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 RPL23AP62750 156 aaKnown RBP9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 GABPB1Q06547 395 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 ZNF816Q0VGE8 651 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 GNMTQ14749 295 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 ACSM3Q53FZ2 586 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 CT45A1Q5HYN5 189 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 ETV3LQ6ZN32 361 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 LINC00311Q8N616 119 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 OR52L2PQ8NGH6 319 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 OR52M1Q8NGK5 317 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 CT45A3Q8NHU0 189 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 RTN4IP1Q8WWV3 396 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 SPACA1Q9HBV2 294 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 PLCXD1Q9NUJ7 323 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 NKX1-2Q9UD57 310 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.86
GTF3C1-208ENST00000567843 FGF16O43320 207 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 IL3RAP26951 378 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 GP2P55259 537 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 KRTAP10-11P60412 298 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 SLC35A2P78381 396 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 EBI3Q14213 229 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 OR2W3Q7Z3T1 314 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 REC114Q7Z4M0 266 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 TGIF2LXQ8IUE1 241 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 MRPL41Q8IXM3 137 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 ZNF439Q8NDP4 499 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 OR2T10Q8NGZ9 312 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 CHPT1Q8WUD6 406 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 FBLIM1Q8WUP2 373 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 ST6GALNAC6Q969X2 333 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 Q96M66 194 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 PLSCR3Q9NRY6 295 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 FKBP14Q9NWM8 211 aa9.64□□□□□ -0.87
GTF3C1-208ENST00000567843 CASQ2O14958 399 aaPredicted RBP9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 IGHG2P01859 326 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 CDK1P06493 297 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 FUT3P21217 361 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 PPP1CCP36873 323 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 GPR12P47775 334 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 F2RL1P55085 397 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 RAB25P57735 213 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 GPR50Q13585 617 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 DEFB121Q5J5C9 76 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 RBM48Q5RL73 367 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 C6orf183Q5T699 404 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 SLC25A48Q6ZT89 311 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 CEACAM19Q7Z692 300 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 FOXRED2Q8IWF2 684 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 IZUMO1Q8IYV9 350 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 STPG2Q8N412 459 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 Q8N6K4 173 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 Q8N9W7 124 aa9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 MRPL30Q8TCC3 161 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-208ENST00000567843 MRPS24Q96EL2 167 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms