RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RCC2Q9P258 522 aaKnown RBP14.03□□□□□ -0.16
NME3-205ENST00000563854 GNG12Q9UBI6 72 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 LINC00527Q9UJ94 153 aa14.03□□□□□ -0.16
NME3-205ENST00000563854 UBE2QL1A1L167 161 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 SERPINE3A8MV23 424 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 C12orf77C9JDV5 145 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 CASQ2O14958 399 aaPredicted RBP14.02□□□□□ -0.17
NME3-205ENST00000563854 SPINT2O43291 252 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.17
NME3-205ENST00000563854 ZNF816Q0VGE8 651 aaPredicted RBP14.02□□□□□ -0.17
NME3-205ENST00000563854 INSL4Q14641 139 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 NANOGP1Q8N7R0 232 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 NKAIN3Q8N8D7 197 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 OR52M1Q8NGK5 317 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 MRAPQ8TCY5 172 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 FBLIM1Q8WUP2 373 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 TFAP2CQ92754 450 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 MRPS24Q96EL2 167 aaKnown RBP14.02□□□□□ -0.17
NME3-205ENST00000563854 CYYR1Q96J86 154 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 TMED9Q9BVK6 235 aa14.02□□□□□ -0.17
NME3-205ENST00000563854 NCBP2LA6PVI3 153 aaKnown RBP14.01□□□□□ -0.17
NME3-205ENST00000563854 PTGES3LE9PB15 166 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 SLC31A2O15432 143 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 LOXL3P58215 753 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 GPR50Q13585 617 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 NKAPLQ5M9Q1 402 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 REC114Q7Z4M0 266 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 SLC35E3Q7Z769 313 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 OR1L1Q8NH94 360 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 THRSPQ92748 146 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 MND1Q9BWT6 205 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 NECAP2Q9NVZ3 263 aa14.01□□□□□ -0.17
NME3-205ENST00000563854 FGF16O43320 207 aa14□□□□□ -0.17
NME3-205ENST00000563854 MPIG6BO95866 241 aa14□□□□□ -0.17
NME3-205ENST00000563854 HBZP02008 142 aa14□□□□□ -0.17
NME3-205ENST00000563854 RCC1P18754 421 aaPredicted RBP14□□□□□ -0.17
NME3-205ENST00000563854 SLC35A2P78381 396 aa14□□□□□ -0.17
NME3-205ENST00000563854 RBM48Q5RL73 367 aaKnown RBP14□□□□□ -0.17
NME3-205ENST00000563854 FAM27D1Q5T7N8 215 aa14□□□□□ -0.17
NME3-205ENST00000563854 Q6ZPA2 131 aa14□□□□□ -0.17
NME3-205ENST00000563854 CDH26Q8IXH8 852 aa14□□□□□ -0.17
NME3-205ENST00000563854 LINC00311Q8N616 119 aa14□□□□□ -0.17
NME3-205ENST00000563854 RTN4IP1Q8WWV3 396 aaPredicted RBP14□□□□□ -0.17
NME3-205ENST00000563854 EAF1Q96JC9 268 aaPredicted RBP14□□□□□ -0.17
NME3-205ENST00000563854 Q96M66 194 aa14□□□□□ -0.17
NME3-205ENST00000563854 RAB9BQ9NP90 201 aa14□□□□□ -0.17
NME3-205ENST00000563854 FKBP14Q9NWM8 211 aa14□□□□□ -0.17
NME3-205ENST00000563854 AURKAIP1Q9NWT8 199 aaPredicted RBP14□□□□□ -0.17
NME3-205ENST00000563854 NUDT19A8MXV4 375 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 CD1AP06126 327 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 CDK1P06493 297 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 FUT3P21217 361 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 ACSM3Q53FZ2 586 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 FOXB2Q5VYV0 432 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 FOXRED2Q8IWF2 684 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 IZUMO1Q8IYV9 350 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 OR2T10Q8NGZ9 312 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 CHPT1Q8WUD6 406 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 RBMXL1Q96E39 390 aaKnown RBP13.99□□□□□ -0.17
NME3-205ENST00000563854 UQCC2Q9BRT2 126 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 CST11Q9H112 138 aa13.99□□□□□ -0.17
NME3-205ENST00000563854 FAM90A10PA6NDY2 464 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 FAM90A7PA6NKC0 464 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 FAM90A23PA8MXZ1 464 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 PDCD6O75340 191 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 MED22Q15528 200 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 OR10K2Q6IF99 312 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 TRAT1Q6PIZ9 186 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 TGIF2LXQ8IUE1 241 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 C8orf31Q8N9H6 132 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 TAF9BQ9HBM6 251 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 SCN3BQ9NY72 215 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 KCNIP1Q9NZI2 227 aa13.98□□□□□ -0.17
NME3-205ENST00000563854 NKX1-2Q9UD57 310 aaPredicted RBP13.98□□□□□ -0.17
NME3-205ENST00000563854 ZNF736B4DX44 427 aaPredicted RBP13.97□□□□□ -0.17
NME3-205ENST00000563854 SLC35B1P78383 322 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 GNMTQ14749 295 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 SPHARQ15513 63 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 TMEM30BQ3MIR4 351 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 CT45A1Q5HYN5 189 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 C6orf141Q5SZD1 244 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 SIGIRRQ6IA17 410 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 SLC25A48Q6ZT89 311 aaKnown RBP13.97□□□□□ -0.17
NME3-205ENST00000563854 C18orf65Q6ZTR6 163 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 C5orf24Q7Z6I8 188 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 LYPD6Q86Y78 171 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 ZNF439Q8NDP4 499 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 CT45A3Q8NHU0 189 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 ST6GALNAC6Q969X2 333 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 KCNK15Q9H427 330 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 DCLRE1BQ9H816 532 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 OR2S2Q9NQN1 319 aa13.97□□□□□ -0.17
NME3-205ENST00000563854 NOTCH3Q9UM47 2321 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 LINC01548A6NM66 108 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 H0YHG0 523 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 CA11O75493 328 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 MOSP00540 346 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 IGHG2P01859 326 aa13.96□□□□□ -0.17
NME3-205ENST00000563854 GPR12P47775 334 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms