RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FXYD6Q9H0Q3 95 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 OR1A1Q9P1Q5 309 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 CTSZQ9UBR2 303 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 HELZ2Q9BYK8 2649 aaKnown RBP18.23■□□□□ 0.51
LINC01960-201ENST00000563759 FAM172BPA6NC97 362 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 TNFRSF13BO14836 293 aaPredicted RBP18.22■□□□□ 0.51
LINC01960-201ENST00000563759 PI3P19957 117 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 ARL11Q969Q4 196 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 OR51J1Q9H342 316 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 GHITMQ9H3K2 345 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 NCOR1P1Q9H4R4 102 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 ZNF69Q9UC07 566 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 GPR132Q9UNW8 380 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 C14orf166Q9Y224 244 aaKnown RBP18.22■□□□□ 0.51
LINC01960-201ENST00000563759 TACC2O95359 2948 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 NPIPB11E5RHQ5 1161 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 SPINT2O43291 252 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 IL5P05113 134 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 OR4E1P0C645 316 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 ZNF728P0DKX0 622 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 AKR1C4P17516 323 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 GZMHP20718 246 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 TAS2R31P59538 309 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 ALX4Q9H161 411 aaPredicted RBP18.22■□□□□ 0.51
LINC01960-201ENST00000563759 C5orf66Q9H5L9 145 aa18.22■□□□□ 0.51
LINC01960-201ENST00000563759 TRGV10A0A0A0MS01 117 aa18.21■□□□□ 0.51
LINC01960-201ENST00000563759 CREBL2O60519 120 aaPredicted RBP18.21■□□□□ 0.51
LINC01960-201ENST00000563759 OR52B4Q8NGK2 314 aa18.21■□□□□ 0.51
LINC01960-201ENST00000563759 SPG11Q96JI7 2443 aa18.21■□□□□ 0.5
LINC01960-201ENST00000563759 ARID1AO14497 2285 aa18.21■□□□□ 0.5
LINC01960-201ENST00000563759 DVL1O14640 695 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 RPS2P15880 293 aaKnown RBP18.2■□□□□ 0.5
LINC01960-201ENST00000563759 ZBTB25P24278 435 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 SLC25A42Q86VD7 318 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 H1FOOQ8IZA3 346 aaPredicted RBP18.2■□□□□ 0.5
LINC01960-201ENST00000563759 ADAD2Q8NCV1 583 aaKnown RBP18.2■□□□□ 0.5
LINC01960-201ENST00000563759 ZFAND1Q8TCF1 268 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 H1FXQ92522 213 aaKnown RBP18.2■□□□□ 0.5
LINC01960-201ENST00000563759 NINJ1Q92982 152 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 OPN4Q9UHM6 478 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 SSNA1O43805 119 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 TUSC2O75896 110 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 HLA-AP01891 365 aaKnown RBP18.2■□□□□ 0.5
LINC01960-201ENST00000563759 TMEM33P57088 247 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 RFESDQ8TAC1 157 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 IGFBPL1Q8WX77 278 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 CENPEQ02224 2701 aa18.2■□□□□ 0.5
LINC01960-201ENST00000563759 C15orf65H3BRN8 121 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 COL8A1P27658 744 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 RRAS2P62070 204 aaPredicted RBP18.19■□□□□ 0.5
LINC01960-201ENST00000563759 RPL31P62899 125 aaKnown RBP18.19■□□□□ 0.5
LINC01960-201ENST00000563759 CR1LQ2VPA4 569 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF626Q68DY1 528 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 SLC38A6Q8IZM9 456 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 SECTM1Q8WVN6 248 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 MED28Q9H204 178 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 RDH8Q9NYR8 311 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 CALYQ9NYX4 217 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 OR2W1Q9Y3N9 320 aa18.19■□□□□ 0.5
LINC01960-201ENST00000563759 hADV38S2A0JD32 116 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 SNRPGP15A8MWD9 76 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 FCN3O75636 299 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 CTSDP07339 412 aaPredicted RBP18.18■□□□□ 0.5
LINC01960-201ENST00000563759 VAMP1P23763 118 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 ABCA11PQ4W5N1 156 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 TMEM155Q4W5P6 130 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 FAHD2BQ6P2I3 314 aaPredicted RBP18.18■□□□□ 0.5
LINC01960-201ENST00000563759 NLRC3Q7RTR2 1065 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 AKAP14Q86UN6 197 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 SPICQ8N5J4 248 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 FAHD2AQ96GK7 314 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 RTBDNQ9BSG5 229 aaPredicted RBP18.18■□□□□ 0.5
LINC01960-201ENST00000563759 RAB9BQ9NP90 201 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 OR2S2Q9NQN1 319 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 CEACAM6P40199 344 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 GPR6P46095 362 aaPredicted RBP18.18■□□□□ 0.5
LINC01960-201ENST00000563759 UCP3P55916 312 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 DHRS2Q13268 280 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 PPP1R1AQ13522 171 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 LTC4SQ16873 150 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 TMEM128Q5BJH2 165 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF295-AS1Q8N0V1 137 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 C19orf12Q9NSK7 152 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF221Q9UK13 617 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 LINC00312Q9Y6C7 94 aa18.18■□□□□ 0.5
LINC01960-201ENST00000563759 HMX3A6NHT5 357 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 HEXAP06865 529 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 UBE2MP61081 183 aaKnown RBP18.17■□□□□ 0.5
LINC01960-201ENST00000563759 MEF2CQ06413 473 aaPredicted RBP18.17■□□□□ 0.5
LINC01960-201ENST00000563759 LPCAT3Q6P1A2 487 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 TCF23Q7RTU1 214 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 OR8B3Q8NGG8 313 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 OR52L2PQ8NGH6 319 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 CHAC2Q8WUX2 184 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 OR8B2Q96RD0 313 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 SLC5A7Q9GZV3 580 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 LPAR3Q9UBY5 353 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 MIOXQ9UGB7 285 aa18.17■□□□□ 0.5
LINC01960-201ENST00000563759 RBM7Q9Y580 266 aaKnown RBP18.17■□□□□ 0.5
LINC01960-201ENST00000563759 MALRD1Q5VYJ5 2156 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms