RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 CCDC71LQ8N9Z2 235 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 OR13A1Q8NGR1 328 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 MRGPRDQ8TDS7 321 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 IL1F10Q8WWZ1 152 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 RAB1CQ92928 201 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 TMEM246Q9BRR3 403 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 TOLLIPQ9H0E2 274 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 CLEC4MQ9H2X3 399 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-205ENST00000562310 LIME1Q9H400 295 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 CHODLQ9H9P2 273 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-205ENST00000562310 ZNF221Q9UK13 617 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 OR2W1Q9Y3N9 320 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
COMMD4-205ENST00000562310 HECTD1Q9ULT8 2610 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 TRAV39A0A0B4J263 110 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 SELLP14151 372 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 PLA2G2AP14555 144 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 AKR1C4P17516 323 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 COL8A2P25067 703 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 EFNA4P52798 201 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 HTD2P86397 168 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 DHODHQ02127 395 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 BAMBIQ13145 260 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 DHRS2Q13268 280 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 PPP1R1AQ13522 171 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 TMEM155Q4W5P6 130 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 SPICQ8N5J4 248 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 ADAD2Q8NCV1 583 aaKnown RBP11.87□□□□□ -0.51
COMMD4-205ENST00000562310 CAPSLQ8WWF8 208 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 NINJ1Q92982 152 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 ARL11Q969Q4 196 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 RTBDNQ9BSG5 229 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-205ENST00000562310 RSRP1Q9BUV0 290 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 TMPRSS13Q9BYE2 586 aa11.87□□□□□ -0.51
COMMD4-205ENST00000562310 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 A0A1B0GW55 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 C9orf170A2RU37 121 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 ZNF729A6NN14 1252 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 C15orf65H3BRN8 121 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 J3QKU1 62 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 OVOL3O00110 214 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 F12P00748 615 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L2P0CJ85 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L3P0CJ86 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L4P0CJ87 422 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L5P0CJ88 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L6P0CJ89 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L7P0CJ90 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 NDUFB7P17568 137 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 VAMP1P23763 118 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 S100GP29377 79 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 TMEM33P57088 247 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 FCN2Q15485 313 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 SGPP2Q8IWX5 399 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 PRR18Q8N4B5 295 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 C12orf45Q8N5I9 185 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 OR52B4Q8NGK2 314 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 OR1L1Q8NH94 360 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 CORO2AQ92828 525 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 PHB2Q99623 299 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 PLEKHF2Q9H8W4 249 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 CALYQ9NYX4 217 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 JPT1Q9UK76 154 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 UBE2J1Q9Y385 318 aaPredicted RBP11.86□□□□□ -0.51
COMMD4-205ENST00000562310 LINC00312Q9Y6C7 94 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
COMMD4-205ENST00000562310 TRBV23-1A0A0A0MS06 115 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 A0A0B4J2A0 478 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 F2RL2O00254 374 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 GPR31O00270 319 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 GPR37O15354 613 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 SFT2D2O95562 160 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 HEXAP06865 529 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 HNRNPCP07910 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
COMMD4-205ENST00000562310 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 ANXA3P12429 323 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 CD34P28906 385 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 SSTR5P35346 364 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 CDKN1AP38936 164 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 LUMP51884 338 aaPredicted RBP11.85□□□□□ -0.51
COMMD4-205ENST00000562310 RND3P61587 244 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 MITD1Q8WV92 249 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
COMMD4-205ENST00000562310 ASB13Q8WXK3 278 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms