RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 LPAR3Q9UBY5 353 aa8.27□□□□□ -1.09
SMG1-205ENST00000561947 ZFHX2Q9C0A1 2572 aaPredicted RBP8.27□□□□□ -1.09
SMG1-205ENST00000561947 M6PRP20645 277 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 CEACAM8P31997 349 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 NKX2-1P43699 371 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 GNMTQ14749 295 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 C3orf36Q3SXR2 165 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 UQCC3Q6UW78 93 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 MUC6Q6W4X9 2439 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 STPG2Q8N412 459 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SUN5Q8TC36 379 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 ARL11Q969Q4 196 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 BSCL2Q96G97 398 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 PRRC2CQ9Y520 2896 aaKnown RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 CHD3Q12873 2000 aaKnown RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 ZSCAN5BA6NJL1 495 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 ZNF705EA8MWA4 302 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 PROB1E7EW31 1015 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 M0R1B8 84 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 HSPA12AO43301 675 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 MST1LQ2TV78 715 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SLC35E4Q6ICL7 350 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 CLEC9AQ6UXN8 241 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 BOLLQ8N9W6 283 aaKnown RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 UBAC2Q8NBM4 344 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 UBALD1Q8TB05 177 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 AKR1E2Q96JD6 320 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 ARV1Q9H2C2 271 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 KCNIP1Q9NZI2 227 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 PIGBOS1A0A0B4J2F0 54 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 NUDT19A8MXV4 375 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 IGLV2-14P01704 120 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 HEXAP06865 529 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 HOXD4P09016 255 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 SULT1A2P50226 295 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 HOXA4Q00056 320 aaPredicted RBP8.26□□□□□ -1.09
SMG1-205ENST00000561947 MSMPQ1L6U9 139 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SMIM21Q3B7S5 101 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 FAM209AQ5JX71 171 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 BPIFCQ8NFQ6 507 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 OR51H1Q8NH63 302 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 MUCL1Q96DR8 90 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 SSUH2Q9Y2M2 353 aa8.26□□□□□ -1.09
SMG1-205ENST00000561947 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 BORCS7-ASMTA0A0B4J1R7 106 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 IFNL4K9M1U5 179 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 PTBP3O95758 552 aaKnown RBP8.25□□□□□ -1.09
SMG1-205ENST00000561947 PVALBP20472 110 aaPredicted RBP8.25□□□□□ -1.09
SMG1-205ENST00000561947 CD200P41217 278 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 POLR2GP62487 172 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG1-205ENST00000561947 KIAA2026Q5HYC2 2103 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 LRP11Q86VZ4 500 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 OR2Z1Q8NG97 314 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 LRRC29Q8WV35 223 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
SMG1-205ENST00000561947 WFDC1Q9HC57 220 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 MMP26Q9NRE1 261 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 SPEF1Q9Y4P9 236 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 RBM7Q9Y580 266 aaKnown RBP8.25□□□□□ -1.09
SMG1-205ENST00000561947 GVINP1Q7Z2Y8 2422 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 AKAP13Q12802 2813 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 OOEPA6NGQ2 149 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 FBXO24O75426 580 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 IGHV3-13P01766 116 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 CRYAAP02489 173 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 SERPINE2P07093 398 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 PSG2P11465 335 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 GLRXP35754 106 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 CEACAM6P40199 344 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 OR3A1P47881 315 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 EWSR1Q01844 656 aaKnown RBP eCLIP8.25□□□□□ -1.09
SMG1-205ENST00000561947 NHLH2Q02577 135 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 FOXC1Q12948 553 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 CXorf66Q5JRM2 361 aaPredicted RBP8.25□□□□□ -1.09
SMG1-205ENST00000561947 OR2C3Q8N628 320 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 ABHD17AQ96GS6 310 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 COQ2Q96H96 371 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 PLA2G2EQ9NZK7 142 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 DUSP13Q9UII6 198 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 KCNS2Q9ULS6 477 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 PPP1R3CQ9UQK1 317 aa8.25□□□□□ -1.09
SMG1-205ENST00000561947 B8ZZF3 427 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 C12orf77C9JDV5 145 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 SSSCA1O60232 199 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 MED6O75586 246 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 TFF1P04155 84 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 NKX6-1P78426 367 aaPredicted RBP8.24□□□□□ -1.09
SMG1-205ENST00000561947 ID3Q02535 119 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 COL10A1Q03692 680 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 AESQ08117 197 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 PXDC1Q5TGL8 231 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 IL34Q6ZMJ4 242 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 OR1L1Q8NH94 360 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 TP53TG5Q9Y2B4 290 aa8.24□□□□□ -1.09
SMG1-205ENST00000561947 A0A0G2JRQ6 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms