RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SLC26A10Q8NG04 563 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 OR1P1Q8NH06 330 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 ITLN2Q8WWU7 325 aaPredicted RBP3.3□□□□□ -1.88
SMG1-204ENST00000561940 FXYD5Q96DB9 178 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 OR2M4Q96R27 311 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 TMEM38BQ9NVV0 291 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 RBM12B-AS1Q9P1G2 102 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 STX18Q9P2W9 335 aaKnown RBP3.3□□□□□ -1.88
SMG1-204ENST00000561940 ZNF706Q9Y5V0 76 aaPredicted RBP3.3□□□□□ -1.88
SMG1-204ENST00000561940 KMT2EQ8IZD2 1858 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 ABCA12Q86UK0 2595 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 PLXNB2O15031 1838 aa3.3□□□□□ -1.88
SMG1-204ENST00000561940 DNAH14Q0VDD8 3507 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 IGKV1D-17A0A075B6S4 117 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 LOC389332A0A1B0GUA5 103 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ERICH4A6NGS2 130 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 CXorf1O96002 111 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 NRASP01111 189 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 HRASP01112 189 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 KRASP01116 189 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 TEAD1P28347 426 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 SPAM1P38567 509 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 SLC18A1P54219 525 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 VSNL1P62760 191 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ELOCQ15369 112 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ACTBL2Q562R1 376 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 CLLU1OSQ5K130 101 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 FAM104BQ5XKR9 115 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 TCAIMQ8N3R3 496 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ZFP62Q8NB50 900 aaPredicted RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 DRAXINQ8NBI3 349 aaPredicted RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 OR2K2Q8NGT1 345 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 OR51Q1Q8NH59 317 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 OR2AE1Q8NHA4 323 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 FMC1Q96HJ9 113 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 SEC22CQ9BRL7 303 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 API5Q9BZZ5 524 aaKnown RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 GOLPH3Q9H4A6 298 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ABCB9Q9NP78 766 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 PARP11Q9NR21 331 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 NLE1Q9NVX2 485 aaPredicted RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 RBM22Q9NW64 420 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMG1-204ENST00000561940 MRM2Q9UI43 246 aaKnown RBP3.29□□□□□ -1.88
SMG1-204ENST00000561940 DOPEY1Q5JWR5 2465 aa3.29□□□□□ -1.88
SMG1-204ENST00000561940 ECM29Q5VYK3 1845 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 ANKRD17O75179 2603 aaKnown RBP3.28□□□□□ -1.88
SMG1-204ENST00000561940 ARAP2Q8WZ64 1704 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 OR2AT4A6NND4 320 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 M0QX08 132 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 IGLV7-43P04211 117 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 IGKV5-2P06315 115 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 DEFB103AP81534 67 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 IL15RAQ13261 267 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 SSX1Q16384 188 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 PSG3Q16557 428 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 KRTAP21-3Q3LHN1 58 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 UGT2A3Q6UWM9 527 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 TRMT10CQ7L0Y3 403 aaKnown RBP3.28□□□□□ -1.88
SMG1-204ENST00000561940 OR5H2Q8NGV7 314 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 TMEM239Q8WW34 195 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 OR5P2Q8WZ92 322 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 C1orf50Q9BV19 199 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 POMKQ9H5K3 350 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 RDH14Q9HBH5 336 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 SDHAF3Q9NRP4 125 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 TEP1Q99973 2627 aaKnown RBP3.28□□□□□ -1.88
SMG1-204ENST00000561940 VPS13AQ96RL7 3174 aa3.28□□□□□ -1.88
SMG1-204ENST00000561940 CEP295Q9C0D2 2601 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SPTAN1Q13813 2472 aaKnown RBP3.27□□□□□ -1.89
SMG1-204ENST00000561940 A0A1B0GXF2 115 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SHOX2O60902 331 aaPredicted RBP3.27□□□□□ -1.89
SMG1-204ENST00000561940 CST4P01036 141 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 CDK1P06493 297 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 GIMD1P0DJR0 217 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SLC6A1P30531 599 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 KCNJ3P48549 501 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 TSPAN5P62079 268 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 TMEM241Q24JQ0 296 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 Q6ZT83 130 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SYCE1Q8N0S2 351 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 OR8G5Q8NG78 346 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 UBA3Q8TBC4 463 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 BLNKQ8WV28 456 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 CCL17Q92583 94 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 RBPMSQ93062 196 aaKnown RBP3.27□□□□□ -1.89
SMG1-204ENST00000561940 PPP1R36Q96LQ0 422 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SRRQ9GZT4 340 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 NXF2Q9GZY0 626 aaKnown RBP3.27□□□□□ -1.89
SMG1-204ENST00000561940 TMBIM4Q9HC24 238 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 FAM60AQ9NP50 221 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 IFT46Q9NQC8 304 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 ENPP5Q9UJA9 477 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 SLC22A7Q9Y694 548 aa3.27□□□□□ -1.89
SMG1-204ENST00000561940 HECTD1Q9ULT8 2610 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 KIR2DS1A0A191URI9 304 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 ZNF233A6NK53 670 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
SMG1-204ENST00000561940 RNASE2P10153 161 aaKnown RBP3.26□□□□□ -1.89
SMG1-204ENST00000561940 XKP51811 444 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms