RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 GFOD1Q9NXC2 390 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 ETAA1Q9NY74 926 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 TRAPPC2LQ9UL33 140 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 ERGIC3Q9Y282 383 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 PEX16Q9Y5Y5 336 aa8.16□□□□□ -1.1
CLK3-205ENST00000561673 IGHV3-72A0A0B4J1Y9 119 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 IGHV1-3A0A0C4DH29 117 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 A6NHS1 94 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 C12orf77C9JDV5 145 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 PTGES3LE9PB15 166 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 HSD17B6O14756 317 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 CRTAPO75718 401 aaPredicted RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 GAPDHP04406 335 aaKnown RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 CDK1P06493 297 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 PF4V1P10720 104 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 MGMTP16455 207 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 ZNF134P52741 427 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 ZNF816Q0VGE8 651 aaPredicted RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 EBI3Q14213 229 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 RNLSQ5VYX0 342 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 SIGIRRQ6IA17 410 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 UNQ9370/PRO34162Q6UXP9 181 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 MOB3BQ86TA1 216 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 ZNF329Q86UD4 541 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 GAPTQ8N292 157 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 C8orf31Q8N9H6 132 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 OR4X2Q8NGF9 303 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 OR4K15Q8NH41 348 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 ST6GALNAC6Q969X2 333 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 NOL4LQ96MY1 436 aaPredicted RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 UQCC2Q9BRT2 126 aa8.15□□□□□ -1.1
CLK3-205ENST00000561673 NKX1-2Q9UD57 310 aaPredicted RBP8.15□□□□□ -1.1
CLK3-205ENST00000561673 PLXNB1O43157 2135 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 UBE2QL1A1L167 161 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 PSMB11A5LHX3 300 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FAM90A10PA6NDY2 464 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FAM90A7PA6NKC0 464 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FAM90A23PA8MXZ1 464 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 SLC31A2O15432 143 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 SPINT2O43291 252 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FGF16O43320 207 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 SC5DO75845 299 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 HBZP02008 142 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 IGLL1P15814 213 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 RCC1P18754 421 aaPredicted RBP8.14□□□□□ -1.11
CLK3-205ENST00000561673 CD33P20138 364 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FUT3P21217 361 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 MAPK3P27361 379 aaPredicted RBP8.14□□□□□ -1.11
CLK3-205ENST00000561673 ACSM3Q53FZ2 586 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 C6orf141Q5SZD1 244 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FAM27D1Q5T7N8 215 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 Q6ZPA2 131 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 PRR18Q8N4B5 295 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 NKAIN3Q8N8D7 197 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 OR10V1Q8NGI7 309 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 OR1L1Q8NH94 360 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 RTN4IP1Q8WWV3 396 aaPredicted RBP8.14□□□□□ -1.11
CLK3-205ENST00000561673 SGCDQ92629 289 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 FAM46BQ96A09 425 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 PHF21AQ96BD5 680 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 EAF1Q96JC9 268 aaPredicted RBP8.14□□□□□ -1.11
CLK3-205ENST00000561673 Q96M66 194 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 MND1Q9BWT6 205 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 VCXQ9H320 206 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 DCLRE1BQ9H816 532 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 LINC00527Q9UJ94 153 aa8.14□□□□□ -1.11
CLK3-205ENST00000561673 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 SERPINE3A8MV23 424 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 ZNF736B4DX44 427 aaPredicted RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 H0YHG0 523 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 IGHG2P01859 326 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 PF4P02776 101 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 GLAP06280 429 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 GPR50Q13585 617 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 Q3ZCU0 254 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 CT45A1Q5HYN5 189 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 C6orf183Q5T699 404 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 FOXB2Q5VYV0 432 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 SLC25A48Q6ZT89 311 aaKnown RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 C5orf24Q7Z6I8 188 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 LRRTM1Q86UE6 522 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 MS4A15Q8N5U1 240 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 Q8N6K4 173 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 ZNF439Q8NDP4 499 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 CT45A3Q8NHU0 189 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 CHPT1Q8WUD6 406 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 NRG4Q8WWG1 115 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 THRSPQ92748 146 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 RBMXL1Q96E39 390 aaKnown RBP8.13□□□□□ -1.11
CLK3-205ENST00000561673 TMED9Q9BVK6 235 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 PLSCR3Q9NRY6 295 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 NECAP2Q9NVZ3 263 aa8.13□□□□□ -1.11
CLK3-205ENST00000561673 GNG12Q9UBI6 72 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms