RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 C1orf194Q5T5A4 169 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 MYPOPQ86VE0 399 aaPredicted RBP14.13□□□□□ -0.15
TPM1-228ENST00000560975 OR1K1Q8NGR3 316 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 OR2T10Q8NGZ9 312 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 NEK7Q8TDX7 302 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 R3HDM4Q96D70 268 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 AURKAIP1Q9NWT8 199 aaPredicted RBP14.13□□□□□ -0.15
TPM1-228ENST00000560975 CLEC18AA5D8T8 446 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 KBTBD11O94819 623 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 CCKARP32238 428 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 PCP4P48539 62 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 Q6ZRM9 215 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 GBGT1Q8N5D6 347 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 CLEC18CQ8NCF0 446 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 PARLQ9H300 379 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 NAGKQ9UJ70 344 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 SDK2Q58EX2 2172 aa14.13□□□□□ -0.15
TPM1-228ENST00000560975 CNOT4O95628 575 aaKnown RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 CHRNA7P36544 502 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR3A1P47881 315 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 SLC25A53Q5H9E4 307 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 ZNF525Q8N782 197 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR2M3Q8NG83 312 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR4F5Q8NH21 305 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 SDSLQ96GA7 329 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR4F4Q96R69 305 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 TBX15Q96SF7 602 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 ULBP2Q9BZM5 246 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 PLSCR2Q9NRY7 297 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 DOCK11Q5JSL3 2073 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 DIDO1Q9BTC0 2240 aaKnown RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 NPIPA2E9PIF3 369 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 NPIPA3F8WFD2 350 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 ZNHIT1O43257 154 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 NUPR1O60356 82 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 CNN1P51911 297 aaKnown RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR8B8Q15620 311 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 MRPL30Q8TCC3 161 aaKnown RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 SLC25A22Q9H936 323 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 PSENENQ9NZ42 101 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 OR6C3Q9NZP0 311 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 CBY1Q9Y3M2 126 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 EXPH5Q8NEV8 1989 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 RPLP1P05386 114 aaKnown RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 PSG2P11465 335 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 DAZAP2Q15038 168 aaPredicted RBP14.12□□□□□ -0.15
TPM1-228ENST00000560975 DCAF10Q5QP82 559 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 ASCL4Q6XD76 172 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 Q6ZSR3 168 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 ANKRD37Q7Z713 158 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 HAPLN4Q86UW8 402 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 IL22RA2Q969J5 263 aa14.12□□□□□ -0.15
TPM1-228ENST00000560975 PGLYRP1O75594 196 aaPredicted RBP14.11□□□□□ -0.15
TPM1-228ENST00000560975 IGKV1D-33P01593 117 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 IGKV1-33P01594 117 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 MLF1P58340 268 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 ACOT6Q3I5F7 207 aaPredicted RBP14.11□□□□□ -0.15
TPM1-228ENST00000560975 TMEM41BQ5BJD5 291 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 ZNF611Q8N823 705 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 CACNG5Q9UF02 275 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 ABCA7Q8IZY2 2146 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 UBE2L5PA0A1B0GUS4 154 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 TMEM210A6NLX4 147 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 SERPINE2P07093 398 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 IRF2P14316 349 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 MSX1P28360 303 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 ZNF92Q03936 586 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 NFAM1Q8NET5 270 aaPredicted RBP14.11□□□□□ -0.15
TPM1-228ENST00000560975 OR10J5Q8NHC4 309 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 MS4A10Q96PG2 267 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 OR4C12Q96R67 309 aa14.11□□□□□ -0.15
TPM1-228ENST00000560975 HPRT1P00492 218 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 GYPAP02724 150 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 SPINK2P20155 84 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 HIST1H3AP68431 136 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 CFHR1Q03591 330 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 SPANXN5Q5MJ07 72 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 C10orf128Q5T292 105 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 ZNF468Q5VIY5 522 aaPredicted RBP14.1□□□□□ -0.15
TPM1-228ENST00000560975 FAM78BQ5VT40 261 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 RPP25LQ8N5L8 163 aaKnown RBP14.1□□□□□ -0.15
TPM1-228ENST00000560975 OR5D13Q8NGL4 314 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 FGF21Q9NSA1 209 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 IL36RNQ9UBH0 155 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 EML6Q6ZMW3 1958 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 TDRG1Q3Y452 100 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 OR8G2PQ6IF36 304 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 RAB40CQ96S21 281 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 DIRC2Q96SL1 478 aa14.1□□□□□ -0.15
TPM1-228ENST00000560975 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 IGKV1-6A0A0C4DH72 117 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 KIR2DL5BA0A0G2JN68 375 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 KIR2DL5BA0A0G2JPC4 375 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 A0A1W2PPC4 97 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 DUXBA0A1W2PPF3 345 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 LRRC75BQ2VPJ9 315 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 KIR2DL5AQ8N109 375 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 TMEM54Q969K7 222 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 ZNF845Q96IR2 970 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms