RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SCN1BQ07699 218 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 AESQ08117 197 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF846Q147U1 533 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 HMGN3Q15651 99 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 BAK1Q16611 211 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 TMEM30BQ3MIR4 351 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 Q5PR19 223 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 CD276Q5ZPR3 534 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 TMEM200BQ69YZ2 307 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 TRAT1Q6PIZ9 186 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 FAM131AQ6UXB0 335 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 NLRC3Q7RTR2 1065 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 Q8N402 240 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 FGFRL1Q8N441 504 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 BPIFB2Q8N4F0 458 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 OR10A7Q8NGE5 316 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 OR8B3Q8NGG8 313 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 NUDCD2Q8WVJ2 157 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 SNAPC3Q92966 411 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 OR8B2Q96RD0 313 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 CMSS1Q9BQ75 279 aaKnown RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 HDHD3Q9BSH5 251 aaPredicted RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 CABLES2Q9BTV7 478 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 REG4Q9BYZ8 158 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 ZMAT3Q9HA38 289 aaKnown RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 ETAA1Q9NY74 926 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 OR6C3Q9NZP0 311 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 KIF25Q9UIL4 384 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 RPUSD1Q9UJJ7 312 aaKnown RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 MRPS7Q9Y2R9 242 aaKnown RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 UBE2J1Q9Y385 318 aaPredicted RBP4.5□□□□□ -1.69
ZEB1-220ENST00000560909 LINC00312Q9Y6C7 94 aa4.5□□□□□ -1.69
ZEB1-220ENST00000560909 WNK2Q9Y3S1 2297 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 IGKV1D-8A0A087WSZ0 117 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 A0A087X0M5 115 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TRBV6-7A0A0A0MS04 114 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 IGKV1-6A0A0C4DH72 117 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KBTBD11-OT1A0A1B0GTJ5 212 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 A0A1B0GX30 115 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 hADV38S2A0JD32 116 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ANKRD20A5PA0PJZ0 165 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF729A6NN14 1252 aaPredicted RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TRDCB7Z8K6 153 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 FAM157AC9JC47 383 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 C12orf77C9JDV5 145 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ITGB1BP1O14713 200 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 FOXH1O75593 365 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 RBBP9O75884 186 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TUSC2O75896 110 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 HEXAP06865 529 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 LIPFP07098 398 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 CD3GP09693 182 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF728P0DKX0 622 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 RCC1P18754 421 aaPredicted RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TBPP20226 339 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 CD34P28906 385 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 IL2RGP31785 369 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 RCVRNP35243 200 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KIR2DS4P43632 304 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 LOXL3P58215 753 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 GNG2P59768 71 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 SEC61A1P61619 476 aaKnown RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 RPL31P62899 125 aaKnown RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 HTD2P86397 168 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 IFITM3Q01628 133 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 PAX8Q06710 450 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 DYRK1AQ13627 763 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KLF9Q13886 244 aaPredicted RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 IL18Q14116 193 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KIR2DS1Q14954 304 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ATXN7L3Q14CW9 347 aaPredicted RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 CARTPTQ16568 116 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 C17orf58Q2M2W7 97 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 Q3ZCU0 254 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ESCO2Q56NI9 601 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KRBOX4Q5JUW0 171 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 VAX1Q5SQQ9 334 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF660Q6AZW8 331 aaPredicted RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 DHRS11Q6UWP2 260 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 HEPN1Q6WQI6 88 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 SPNS3Q6ZMD2 512 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 BTN2A1Q7KYR7 527 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 GDPD3Q7L5L3 318 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 OVCH2Q7RTZ1 564 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 SNX29P2Q8IUI4 249 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 KIR3DL3Q8N743 410 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 C8orf31Q8N9H6 132 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 DTX3Q8N9I9 347 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF565Q8N9K5 539 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ASCC1Q8N9N2 400 aaKnown RBP4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TMEM229BQ8NBD8 167 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 WFDC11Q8NEX6 87 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 TMEM185AQ8NFB2 350 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 OR52M1Q8NGK5 317 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 OR4A4PQ8NGN8 299 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 OR13A1Q8NGR1 328 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 ZNF596Q8TC21 504 aa4.49□□□□□ -1.69
ZEB1-220ENST00000560909 FAM216AQ8WUB2 273 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms