RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 C5orf24Q7Z6I8 188 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 C8orf59Q8N0T1 100 aaPredicted RBP8.08□□□□□ -1.12
LDLR-214ENST00000560628 TMEM104Q8NE00 496 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 OR10V1Q8NGI7 309 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 OR52M1Q8NGK5 317 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 OR1L1Q8NH94 360 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 CHPT1Q8WUD6 406 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 DERL3Q96Q80 235 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 SELENOIQ9C0D9 397 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 C8orf4Q9NR00 106 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 PSORS1C1Q9UIG5 152 aa8.08□□□□□ -1.12
LDLR-214ENST00000560628 NUDT19A8MXV4 375 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 SPINT2O43291 252 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 FGF16O43320 207 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 CRTAPO75718 401 aaPredicted RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 HBZP02008 142 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 MGMTP16455 207 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 RCC1P18754 421 aaPredicted RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 FSTP19883 344 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 HOXD3P31249 432 aaPredicted RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 ZNF134P52741 427 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 TAS2R43P59537 309 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 RPL23AP62750 156 aaKnown RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 SLC35A2P78381 396 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 EBI3Q14213 229 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 INSL4Q14641 139 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 CT45A1Q5HYN5 189 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 OR2W3Q7Z3T1 314 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 LINC00311Q8N616 119 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 OR2T10Q8NGZ9 312 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 CT45A3Q8NHU0 189 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 RTN4IP1Q8WWV3 396 aaPredicted RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 ST6GALNAC6Q969X2 333 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 FAM46BQ96A09 425 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 MRPS24Q96EL2 167 aaKnown RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 SPACA1Q9HBV2 294 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 CNOT2Q9NZN8 540 aaKnown RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 RCC2Q9P258 522 aaKnown RBP8.07□□□□□ -1.12
LDLR-214ENST00000560628 GNG12Q9UBI6 72 aa8.07□□□□□ -1.12
LDLR-214ENST00000560628 ANKRD65E5RJM6 399 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 K7EIL1 84 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 MYL12BO14950 172 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 IGHG2P01859 326 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 FUT3P21217 361 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 IL3RAP26951 378 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 WNT4P56705 351 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 SLC35B1P78383 322 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 DEFB121Q5J5C9 76 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 FAM27D1Q5T7N8 215 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 SIGIRRQ6IA17 410 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 C8orf86Q6ZUL3 223 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 TGIF2LXQ8IUE1 241 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 FOXRED2Q8IWF2 684 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 CDH26Q8IXH8 852 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 MRPL41Q8IXM3 137 aaKnown RBP8.06□□□□□ -1.12
LDLR-214ENST00000560628 STPG2Q8N412 459 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 Q8N6K4 173 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 NANOGP1Q8N7R0 232 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 LINC00482Q8N8I6 264 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 C8orf31Q8N9H6 132 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 Q8N9W7 124 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 TFAP2CQ92754 450 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 RCC1LQ96I51 464 aaKnown RBP8.06□□□□□ -1.12
LDLR-214ENST00000560628 DUX3Q96PT4 197 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 TAF9BQ9HBM6 251 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 PLCXD1Q9NUJ7 323 aa8.06□□□□□ -1.12
LDLR-214ENST00000560628 WI2-2373I1.2A0A1W2PRP0 233 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 PTGES3LE9PB15 166 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 MOSP00540 346 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 CD1AP06126 327 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 CD1BP29016 333 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 GPR12P47775 334 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 THBS3P49746 956 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 F2RL1P55085 397 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 GNMTQ14749 295 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 ACSM3Q53FZ2 586 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 NKAPLQ5M9Q1 402 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 C6orf183Q5T699 404 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 OGFRL1Q5TC84 451 aaPredicted RBP8.05□□□□□ -1.12
LDLR-214ENST00000560628 OR10K2Q6IF99 312 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 LCNL1Q6ZST4 164 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 SLC25A48Q6ZT89 311 aaKnown RBP8.05□□□□□ -1.12
LDLR-214ENST00000560628 IZUMO1Q8IYV9 350 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 ZNF439Q8NDP4 499 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 KLHL30-AS1Q8NEE0 82 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 OR51D1Q8NGF3 324 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 OR52L2PQ8NGH6 319 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 FBLIM1Q8WUP2 373 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 Q96M66 194 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 S1PR3Q99500 378 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 RASL11BQ9BPW5 248 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 ABCG5Q9H222 651 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 OR2S2Q9NQN1 319 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 ZFP57Q9NU63 452 aa8.05□□□□□ -1.12
LDLR-214ENST00000560628 KCNIP1Q9NZI2 227 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms