RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 FAM216BQ8N7L0 139 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 OR51S1Q8NGJ8 323 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 OR56B4Q8NH76 319 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 TERB2Q8NHR7 220 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 GIMAP1Q8WWP7 306 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 IL1F10Q8WWZ1 152 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 H1FXQ92522 213 aaKnown RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 FAM168AQ92567 244 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 CREB3L1Q96BA8 519 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 RAB39BQ96DA2 213 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 COQ2Q96H96 371 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 PIMREGQ9BSJ6 248 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 TINAGL1Q9GZM7 467 aaPredicted RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 GAL3ST2Q9H3Q3 398 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 TAF9BQ9HBM6 251 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 SLC23A1Q9UHI7 598 aa5.35□□□□□ -1.55
SPG11-221ENST00000560299 UBE2J1Q9Y385 318 aaPredicted RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 NSD1Q96L73 2696 aaPredicted RBP5.35□□□□□ -1.55
SPG11-221ENST00000560299 TRBV23-1A0A0A0MS06 115 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 hCG_1809904A0A1W2PP81 198 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 A0A1W2PPE2 198 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 A0A1W2PR64 198 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 A0A1W2PRV1 198 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 FAM172BPA6NC97 362 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ZNF729A6NN14 1252 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 CEACAM18A8MTB9 384 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 INMT-MINDY4F8WBC2 141 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 SDCBPO00560 298 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 DVL1O14640 695 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 TNFRSF13BO14836 293 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 NDUFS7O75251 213 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 LY6HO94772 140 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 NDUFB6O95139 128 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 IGHV4-39P01824 125 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 RLN1P04808 185 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 WNT2P09544 360 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 SCTP09683 121 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 H2AFB2P0C5Z0 115 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 RCC1P18754 421 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 S100GP29377 79 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 FCGR2CP31995 323 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 CCR6P51684 374 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 HOXA4Q00056 320 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 SURF2Q15527 256 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 HMGN3Q15651 99 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 CR1LQ2VPA4 569 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 PLA1AQ53H76 456 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ESCO2Q56NI9 601 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 AVPI1Q5T686 147 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 FAAP20Q6NZ36 180 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ZDHHC22Q8N966 263 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 OR4D10Q8NGI6 311 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ZFAND1Q8TCF1 268 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 MRGPRDQ8TDS7 321 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 FAM216AQ8WUB2 273 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 CORO2AQ92828 525 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ARL11Q969Q4 196 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 KIRREL1Q96J84 757 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 SLC6A7Q99884 636 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 ZNF2Q9BSG1 426 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 MARVELD1Q9BSK0 173 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 PATZ1Q9HBE1 687 aaKnown RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 GPN1Q9HCN4 374 aaPredicted RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 NUDT15Q9NV35 164 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 TAS2R3Q9NYW6 316 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 CLN8Q9UBY8 286 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 C14orf166Q9Y224 244 aaKnown RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 RBM7Q9Y580 266 aaKnown RBP5.34□□□□□ -1.55
SPG11-221ENST00000560299 LINC00312Q9Y6C7 94 aa5.34□□□□□ -1.55
SPG11-221ENST00000560299 NIPBLQ6KC79 2804 aaeCLIP5.33□□□□□ -1.56
SPG11-221ENST00000560299 ACANP16112 2415 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZANQ9Y493 2812 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 IGKV1D-8A0A087WSZ0 117 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 TRBV6-7A0A0A0MS04 114 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 KBTBD11-OT1A0A1B0GTJ5 212 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 CYSRT1A8MQ03 144 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 C12orf77C9JDV5 145 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 NPIPB11E5RHQ5 1161 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 PRAF2O60831 178 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 PEX14O75381 377 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 SLC22A5O76082 557 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 HBZP02008 142 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 TFF1P04155 84 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZNF735P0CB33 412 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 SELLP14151 372 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 PGAM2P15259 253 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 BTCP35070 178 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 CEACAM6P40199 344 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 UCP3P55916 312 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 TAS2R31P59538 309 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 GNB2P62879 340 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 HTD2P86397 168 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ABCA11PQ4W5N1 156 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 IGSF11Q5DX21 431 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 LYPD2Q6UXB3 125 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 Q6ZNX1 250 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 FAM185AQ8N0U4 392 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 ZNF525Q8N782 197 aa5.33□□□□□ -1.56
SPG11-221ENST00000560299 TPRX1Q8N7U7 411 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms