RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 C1orf123Q9NWV4 160 aa16.86■□□□□ 0.29
PSEN1-225ENST00000560005 SCP2D1Q9UJQ7 156 aa16.86■□□□□ 0.29
PSEN1-225ENST00000560005 POMT1Q9Y6A1 747 aa16.86■□□□□ 0.29
PSEN1-225ENST00000560005 MEIS3P1A6NDR6 274 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 F8VVB4 439 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 F8VWA3 439 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 SSX5O60225 188 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 TAS2R46P59540 309 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 BPIFB3P59826 476 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 SRSF7Q16629 238 aaKnown RBP eCLIP16.85■□□□□ 0.29
PSEN1-225ENST00000560005 PLA1AQ53H76 456 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 RNASE10Q5GAN6 216 aaKnown RBP16.85■□□□□ 0.29
PSEN1-225ENST00000560005 PRAMEF6Q5VXH4 476 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 ZNF782Q6ZMW2 699 aaPredicted RBP16.85■□□□□ 0.29
PSEN1-225ENST00000560005 Q6ZPA2 131 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 NEIL1Q96FI4 390 aaPredicted RBP16.85■□□□□ 0.29
PSEN1-225ENST00000560005 UFSP2Q9NUQ7 469 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 MCUBQ9NWR8 336 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 NLKQ9UBE8 527 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 MIOXQ9UGB7 285 aa16.85■□□□□ 0.29
PSEN1-225ENST00000560005 C3orf80F5H4A9 247 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 G3V4G9 280 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 PRB2P02812 416 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-225ENST00000560005 MT-ND4P03905 459 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 CD3DP04234 171 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 IRF2P14316 349 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 RPL15P61313 204 aaKnown RBP16.84■□□□□ 0.29
PSEN1-225ENST00000560005 MPPED2Q15777 294 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 C2orf68Q2NKX9 166 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 BEAN1Q3B7T3 259 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 ACP7Q6ZNF0 438 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 Q8TCH9 128 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 LRRC29Q8WV35 223 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 SSMEM1Q8WWF3 244 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 DYRK2Q92630 601 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 ZNF488Q96MN9 340 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 SULT4A1Q9BR01 284 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 MARVELD1Q9BSK0 173 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 AK3Q9UIJ7 227 aa16.84■□□□□ 0.29
PSEN1-225ENST00000560005 ELF5Q9UKW6 265 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-225ENST00000560005 LRRC30A6NM36 301 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 GPR137BO60478 399 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 DHFRP00374 187 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 CYB5R3P00387 301 aaPredicted RBP16.83■□□□□ 0.28
PSEN1-225ENST00000560005 TCRBP04435 133 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 IFNA6P05013 189 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 ZNF44P15621 663 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 SPNP16150 400 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 AMY2BP19961 511 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 KCNJ3P48549 501 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 BTN2A1Q7KYR7 527 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 TMEM17Q86X19 198 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 BEST4Q8NFU0 473 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 OR8B3Q8NGG8 313 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 OR4C16Q8NGL9 310 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 OR4K15Q8NH41 348 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 NEK7Q8TDX7 302 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 OR8B2Q96RD0 313 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 PRRT1Q99946 306 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 SLC25A21Q9BQT8 299 aaPredicted RBP16.83■□□□□ 0.28
PSEN1-225ENST00000560005 TMEM246Q9BRR3 403 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 PCGF1Q9BSM1 259 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 C12orf4Q9NQ89 552 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 RNF7Q9UBF6 113 aa16.83■□□□□ 0.28
PSEN1-225ENST00000560005 A0A1B0GVG6 124 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 LMO1P25800 156 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 HLA-DMAP28067 261 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 BTCP35070 178 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 OR3A3P47888 321 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 SNU13P55769 128 aaKnown RBP16.82■□□□□ 0.28
PSEN1-225ENST00000560005 RBMS2Q15434 407 aaKnown RBP16.82■□□□□ 0.28
PSEN1-225ENST00000560005 RSBN1Q5VWQ0 802 aaPredicted RBP16.82■□□□□ 0.28
PSEN1-225ENST00000560005 Q6P435 159 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 ZNF826PQ6ZT77 177 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 NLRC3Q7RTR2 1065 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 SUMF2Q8NBJ7 301 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 OR56B4Q8NH76 319 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 ST6GALNAC5Q9BVH7 336 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 DPCDQ9BVM2 203 aaPredicted RBP16.82■□□□□ 0.28
PSEN1-225ENST00000560005 CLN8Q9UBY8 286 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 MGAT4AQ9UM21 535 aa16.82■□□□□ 0.28
PSEN1-225ENST00000560005 UBE2QL1A1L167 161 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 INMT-MINDY4F8WBC2 141 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 TNFRSF13BO14836 293 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-225ENST00000560005 HAND1O96004 215 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 GRK1Q15835 563 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 VAX1Q5SQQ9 334 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 SFRP4Q6FHJ7 346 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-225ENST00000560005 Q6ZS49 121 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 MOGAT3Q86VF5 341 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 C1orf87Q8N0U7 546 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 BATF2Q8N1L9 274 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 ARRDC1Q8N5I2 433 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 GVQW1Q8N7I0 195 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 OR5H2Q8NGV7 314 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 PPP1R35Q8TAP8 253 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 ZNF286AQ9HBT8 521 aa16.81■□□□□ 0.28
PSEN1-225ENST00000560005 CHMP1AQ9HD42 196 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-225ENST00000560005 TRBV6-6A0A0A6YYG2 114 aa16.8■□□□□ 0.28
PSEN1-225ENST00000560005 C22orf46C9J442 243 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms