RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RSL24D1Q9UHA3 163 aaKnown RBP8.85□□□□□ -0.99
TPM1-217ENST00000559108 MEIOCA2RUB1 952 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 FUOMA2VDF0 154 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 METTL21EPA6NDL7 271 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 F2RL2O00254 374 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 NPFFO15130 113 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 ORC5O43913 435 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 HLA-DQB1P01920 261 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 SCTP09683 121 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 CD3GP09693 182 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 HNF1AP20823 631 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 CD34P28906 385 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 UBE2E1P51965 193 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 DIAPH2-AS1Q14236 149 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 GPR157Q5UAW9 335 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 ZNF626Q68DY1 528 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 PRR18Q8N4B5 295 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 SIGLECL1Q8N7X8 197 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 ZNF439Q8NDP4 499 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 OR11H6Q8NGC7 330 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 OR4P4Q8NGL7 312 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 ARL11Q969Q4 196 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 CMSS1Q9BQ75 279 aaKnown RBP8.84□□□□□ -0.99
TPM1-217ENST00000559108 NXF2Q9GZY0 626 aaKnown RBP8.84□□□□□ -0.99
TPM1-217ENST00000559108 GAL3ST2Q9H3Q3 398 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 AUNIPQ9H7T9 357 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 C12orf4Q9NQ89 552 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 OR1A1Q9P1Q5 309 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 TRAPPC2LQ9UL33 140 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 JMJD1CQ15652 2540 aa8.84□□□□□ -0.99
TPM1-217ENST00000559108 MEIS3P1A6NDR6 274 aa8.83□□□□□ -1
TPM1-217ENST00000559108 CCDC160A6NGH7 325 aa8.83□□□□□ -1
TPM1-217ENST00000559108 A6NHS1 94 aa8.83□□□□□ -1
TPM1-217ENST00000559108 TMEM127O75204 238 aa8.83□□□□□ -1
TPM1-217ENST00000559108 CA11O75493 328 aa8.83□□□□□ -1
TPM1-217ENST00000559108 VENTXO95231 258 aa8.83□□□□□ -1
TPM1-217ENST00000559108 FCER2P06734 321 aa8.83□□□□□ -1
TPM1-217ENST00000559108 FPR2P25090 351 aa8.83□□□□□ -1
TPM1-217ENST00000559108 NFYBP25208 207 aa8.83□□□□□ -1
TPM1-217ENST00000559108 GNG10P50151 68 aa8.83□□□□□ -1
TPM1-217ENST00000559108 ZNF134P52741 427 aa8.83□□□□□ -1
TPM1-217ENST00000559108 TAS2R20P59543 309 aa8.83□□□□□ -1
TPM1-217ENST00000559108 HLA-DRB3P79483 266 aa8.83□□□□□ -1
TPM1-217ENST00000559108 DYNC1I2Q13409 638 aaKnown RBP8.83□□□□□ -1
TPM1-217ENST00000559108 HACD4Q5VWC8 232 aa8.83□□□□□ -1
TPM1-217ENST00000559108 LDLRAD3Q86YD5 345 aa8.83□□□□□ -1
TPM1-217ENST00000559108 OR10V1Q8NGI7 309 aa8.83□□□□□ -1
TPM1-217ENST00000559108 SETD6Q8TBK2 473 aa8.83□□□□□ -1
TPM1-217ENST00000559108 GFOD1Q9NXC2 390 aa8.83□□□□□ -1
TPM1-217ENST00000559108 PSG11Q9UQ72 335 aa8.83□□□□□ -1
TPM1-217ENST00000559108 C2CD3Q4AC94 2353 aa8.82□□□□□ -1
TPM1-217ENST00000559108 SMIM31A0A1B0GVY4 71 aa8.82□□□□□ -1
TPM1-217ENST00000559108 A0A1W2PPH5 198 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ZNF701M0R085 212 aaPredicted RBP8.82□□□□□ -1
TPM1-217ENST00000559108 SDCBPO00560 298 aaPredicted RBP8.82□□□□□ -1
TPM1-217ENST00000559108 XRCC3O43542 346 aa8.82□□□□□ -1
TPM1-217ENST00000559108 APOA1P02647 267 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ARG1P05089 322 aa8.82□□□□□ -1
TPM1-217ENST00000559108 MELTFP08582 738 aa8.82□□□□□ -1
TPM1-217ENST00000559108 GSTP1P09211 210 aaKnown RBP8.82□□□□□ -1
TPM1-217ENST00000559108 GSTT2P0CG29 244 aa8.82□□□□□ -1
TPM1-217ENST00000559108 GSTT2BP0CG30 244 aa8.82□□□□□ -1
TPM1-217ENST00000559108 PPP1CCP36873 323 aaKnown RBP8.82□□□□□ -1
TPM1-217ENST00000559108 IGSF11Q5DX21 431 aa8.82□□□□□ -1
TPM1-217ENST00000559108 NCR3LG1Q68D85 454 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ABHD12Q8N2K0 398 aa8.82□□□□□ -1
TPM1-217ENST00000559108 GVQW1Q8N7I0 195 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ZDHHC22Q8N966 263 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ZNF565Q8N9K5 539 aa8.82□□□□□ -1
TPM1-217ENST00000559108 ACOT12Q8WYK0 555 aa8.82□□□□□ -1
TPM1-217ENST00000559108 TAF15Q92804 592 aaKnown RBP eCLIP8.82□□□□□ -1
TPM1-217ENST00000559108 DUX5Q96PT3 197 aa8.82□□□□□ -1
TPM1-217ENST00000559108 CLEC7AQ9BXN2 247 aa8.82□□□□□ -1
TPM1-217ENST00000559108 MS4A7Q9GZW8 240 aaPredicted RBP8.82□□□□□ -1
TPM1-217ENST00000559108 PRDM13Q9H4Q3 707 aa8.82□□□□□ -1
TPM1-217ENST00000559108 CHMP1AQ9HD42 196 aaPredicted RBP8.82□□□□□ -1
TPM1-217ENST00000559108 SERPINE3A8MV23 424 aa8.81□□□□□ -1
TPM1-217ENST00000559108 LY6LH3BQJ8 138 aa8.81□□□□□ -1
TPM1-217ENST00000559108 IGHV4-59P01825 116 aa8.81□□□□□ -1
TPM1-217ENST00000559108 GZMHP20718 246 aa8.81□□□□□ -1
TPM1-217ENST00000559108 ARFRP1Q13795 201 aa8.81□□□□□ -1
TPM1-217ENST00000559108 HLA-DRB5Q30154 266 aa8.81□□□□□ -1
TPM1-217ENST00000559108 PLA1AQ53H76 456 aa8.81□□□□□ -1
TPM1-217ENST00000559108 CT45A1Q5HYN5 189 aa8.81□□□□□ -1
TPM1-217ENST00000559108 C6orf183Q5T699 404 aa8.81□□□□□ -1
TPM1-217ENST00000559108 CNIH2Q6PI25 160 aa8.81□□□□□ -1
TPM1-217ENST00000559108 ODF3L1Q8IXM7 274 aa8.81□□□□□ -1
TPM1-217ENST00000559108 CT45A3Q8NHU0 189 aa8.81□□□□□ -1
TPM1-217ENST00000559108 PIFOQ8TCI5 191 aa8.81□□□□□ -1
TPM1-217ENST00000559108 SNAPC3Q92966 411 aa8.81□□□□□ -1
TPM1-217ENST00000559108 ABHD1Q96SE0 405 aa8.81□□□□□ -1
TPM1-217ENST00000559108 HEXA-AS1Q9H8Q6 139 aa8.81□□□□□ -1
TPM1-217ENST00000559108 A0A0A6YYH2 397 aa8.8□□□□□ -1
TPM1-217ENST00000559108 DNAJC9-AS1A6NH13 148 aa8.8□□□□□ -1
TPM1-217ENST00000559108 A6NJ64 397 aa8.8□□□□□ -1
TPM1-217ENST00000559108 H3BUI4 141 aa8.8□□□□□ -1
TPM1-217ENST00000559108 J3QR06 171 aa8.8□□□□□ -1
TPM1-217ENST00000559108 NOL3O60936 208 aaKnown RBP8.8□□□□□ -1
TPM1-217ENST00000559108 PNLIPRP3Q17RR3 467 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms