RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 SSC4DQ8WTU2 575 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 BCL2L2Q92843 193 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 TMEM54Q969K7 222 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ISOC2Q96AB3 205 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 MUCL1Q96DR8 90 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 GNPNAT1Q96EK6 184 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ARHGAP5-AS1Q96IT6 56 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ZNF75AQ96N20 296 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CIB3Q96Q77 187 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 RNF126Q9BV68 326 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ST6GALNAC5Q9BVH7 336 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 PHF7Q9BWX1 381 aaPredicted RBP4.78□□□□□ -1.64
GABPB1-207ENST00000558335 PECRQ9BY49 303 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CTDSP1Q9GZU7 261 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 SLC5A7Q9GZV3 580 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 BANF2Q9H503 90 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 C5orf66Q9H5L9 145 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CHODLQ9H9P2 273 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 CBLN4Q9NTU7 201 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 HIF1ANQ9NWT6 349 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 MED29Q9NX70 200 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 ANXA10Q9UJ72 324 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 OR51B2Q9Y5P1 312 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 B3GALT1Q9Y5Z6 326 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 PDE4DIPQ5VU43 2346 aa4.78□□□□□ -1.64
GABPB1-207ENST00000558335 LOC100509620A0A075B734 347 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 LOC102723996A0A087X1L8 192 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 KIR2DS1A0A191URI9 304 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 A0A1W2PPE2 198 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 A4D1N5 150 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 C4orf47A7E2U8 309 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF850A8MQ14 1090 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 C2CD4DB7Z1M9 353 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 H3BML4 177 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 M0R135 149 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 RBFOX2O43251 390 aaKnown RBP eCLIP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 DHHO43323 396 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 LAMTOR5O43504 91 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 MPZL1O95297 269 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 TSPAN13O95857 204 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 GPANK1O95872 356 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 IFNA5P01569 189 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 LCATP04180 440 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 CTSBP07858 339 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 MMP7P09237 267 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 OR5G3P0C626 314 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FAM157CP0CG43 387 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FCGR2AP12318 317 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 HLA-DOBP13765 273 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 EN2P19622 333 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 TCN2P20062 427 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 GZMHP20718 246 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 UCP1P25874 307 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FCGR2CP31995 323 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 OTX2P32243 289 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 SFTPDP35247 375 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 PTGER4P35408 488 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 KIR2DS4P43632 304 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 SSR4P51571 173 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 MTCP1P56278 107 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FMODQ06828 376 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 PNRC1Q12796 327 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF154Q13106 437 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 IL15RAQ13261 267 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 KIR2DS1Q14954 304 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 VAMP3Q15836 100 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 TMEM176BQ3YBM2 270 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 C5orf47Q569G3 176 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 C1orf189Q5VU69 101 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FAM69BQ5VUD6 431 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 BTNL8Q6UX41 500 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ASCL4Q6XD76 172 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 RPS19BP1Q86WX3 136 aaKnown RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 TGIF2LYQ8IUE0 185 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 GVQW1Q8N7I0 195 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ADAD2Q8NCV1 583 aaKnown RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 OR13G1Q8NGZ3 307 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 TMED6Q8WW62 240 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 IL22RA2Q969J5 263 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 RBMXL1Q96E39 390 aaKnown RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 BORCS8Q96FH0 119 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 MRAP2Q96G30 205 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF799Q96GE5 643 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 Q96M66 194 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 FER1L6-AS2Q96M78 137 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 GUCD1Q96NT3 240 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 GINS3Q9BRX5 216 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 RTBDNQ9BSG5 229 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ULBP2Q9BZM5 246 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 NAA60Q9H7X0 242 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 ELL3Q9HB65 397 aaPredicted RBP4.77□□□□□ -1.65
GABPB1-207ENST00000558335 CYTL1Q9NRR1 136 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 UQCR10Q9UDW1 63 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 SLC45A2Q9UMX9 530 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 PIGLQ9Y2B2 252 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 AMDHD2Q9Y303 409 aa4.77□□□□□ -1.65
GABPB1-207ENST00000558335 UBE2J1Q9Y385 318 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms