RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ARHGAP11BQ3KRB8 267 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 TMEM255AQ5JRV8 349 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 ZNF678Q5SXM1 525 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 OR52W1Q6IF63 320 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 SLC48A1Q6P1K1 146 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 CEMP1Q6PRD7 247 aaPredicted RBP4.14□□□□□ -1.75
RTF1-204ENST00000558117 TSEN54Q7Z6J9 526 aaKnown RBP4.14□□□□□ -1.75
RTF1-204ENST00000558117 C15orf54Q8N8G6 183 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 STAG3L4Q8TBR4 150 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 PIFOQ8TCI5 191 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 KCNA7Q96RP8 456 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 SORT1Q99523 831 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 DERL2Q9GZP9 239 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 POPDC3Q9HBV1 291 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 STX18Q9P2W9 335 aaKnown RBP4.14□□□□□ -1.75
RTF1-204ENST00000558117 CLN8Q9UBY8 286 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 OARD1Q9Y530 152 aa4.14□□□□□ -1.75
RTF1-204ENST00000558117 KBTBD11-OT1A0A1B0GTJ5 212 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 PHYHO14832 338 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 NPFFO15130 113 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 ATP5LO75964 103 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 HLA-HP01893 362 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 S100A6P06703 90 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 CD55P08174 381 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 OR9G9P0C7N8 305 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 HMOX2P30519 316 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 MAP3K8P41279 467 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 VDAC2P45880 294 aaPredicted RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 DNAJB13P59910 316 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 ARF6P62330 175 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 CTAG1AP78358 180 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 ZNF117Q03924 483 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 MOGQ16653 247 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 TIGITQ495A1 244 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 LY6G6FQ5SQ64 297 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 C3orf33Q6P1S2 294 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 C10orf99Q6UWK7 81 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 ASCL4Q6XD76 172 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 AAED1Q7RTV5 226 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 MRPL21Q7Z2W9 205 aaKnown RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 C8orf31Q8N9H6 132 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 OR8B3Q8NGG8 313 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 OR51L1Q8NGJ5 315 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 ANGPTL6Q8NI99 470 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 GPR119Q8TDV5 335 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 CACNG8Q8WXS5 425 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 RORBQ92753 470 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 FAM210AQ96ND0 272 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 TRNT1Q96Q11 434 aaKnown RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 OR8B2Q96RD0 313 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 EBF4Q9BQW3 602 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 TMEM246Q9BRR3 403 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 NSRP1Q9H0G5 558 aaKnown RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 WDR55Q9H6Y2 383 aaPredicted RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 RETNQ9HD89 108 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 SIRT7Q9NRC8 400 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 CLEC5AQ9NY25 188 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 TIMM22Q9Y584 194 aa4.13□□□□□ -1.75
RTF1-204ENST00000558117 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
RTF1-204ENST00000558117 A0A1W2PRD5 423 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 A0A1W2PRF3 423 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 A0A1W2PRM7 423 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 SYCE1LA8MT33 242 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 C16orf90A8MZG2 172 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 TMEM114B3SHH9 223 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 SEC14L6B5MCN3 397 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 LINC00032P0C843 101 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 UBCP0CG48 685 aaKnown RBP4.12□□□□□ -1.75
RTF1-204ENST00000558117 SERPINB1P30740 379 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 RRM2P31350 389 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 RPL14P50914 215 aaKnown RBP4.12□□□□□ -1.75
RTF1-204ENST00000558117 PSMD4P55036 377 aaKnown RBP4.12□□□□□ -1.75
RTF1-204ENST00000558117 LAGE3Q14657 143 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 USF2Q15853 346 aaPredicted RBP4.12□□□□□ -1.75
RTF1-204ENST00000558117 ZSCAN26Q16670 478 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 PAGE2BQ5JRK9 111 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 DCST2Q5T1A1 773 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 BAIAP2L2Q6UXY1 529 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 Q6ZSR3 168 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 VMO1Q7Z5L0 202 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 PNKDQ8N490 385 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 ZNF645Q8N7E2 425 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 FNDC5Q8NAU1 212 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 OR4A4PQ8NGN8 299 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 OR9A2Q8NGT5 310 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 C17orf50Q8WW18 174 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 C11orf40Q8WZ69 217 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 ZHX1-C8orf76Q96EF9 292 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 OR52B2Q96RD2 323 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 PRRG3Q9BZD7 231 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 TAS2R9Q9NYW1 312 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 DHRS4-AS1Q9P1J3 65 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 PCTPQ9UKL6 214 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 RNF24Q9Y225 148 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 ARL2BPQ9Y2Y0 163 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 RNF11Q9Y3C5 154 aa4.12□□□□□ -1.75
RTF1-204ENST00000558117 TNCP24821 2201 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 A0A1W2PQD3 144 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 KLLNB2CW77 178 aa4.11□□□□□ -1.75
RTF1-204ENST00000558117 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms