RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ZNF787Q6DD87 383 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 AGBL5Q8NDL9 886 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 ADGRG7Q96K78 797 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 PRDM13Q9H4Q3 707 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 SDF2L1Q9HCN8 221 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 UFSP2Q9NUQ7 469 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 PITPNC1Q9UKF7 332 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
SHMT2-232ENST00000557487 SHANK1Q9Y566 2161 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 DNAH14Q0VDD8 3507 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 NPIPB11E5RHQ5 1161 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 TRAPPC2LH3BP13 241 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 P04436 131 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 PATE4P0C8F1 98 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 NTF4P34130 210 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 HBG1P69891 147 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 HBG2P69892 147 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 PRDX4Q13162 271 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 ZDHHC23Q8IYP9 409 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 AGMATQ9BSE5 352 aa13.93□□□□□ -0.18
SHMT2-232ENST00000557487 KIAA1324LA8MWY0 1029 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-232ENST00000557487 CYTIPO60759 359 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 TRGC1P0CF51 173 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 GPX4P36969 197 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-232ENST00000557487 PRSS12P56730 875 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 LPAL2Q16609 132 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 C9orf152Q5JTZ5 239 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 GPR146Q96CH1 333 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 CABLES2Q9BTV7 478 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 LINC00470Q9BZP3 86 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 OCIAD1Q9NX40 245 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 TSTD3H0UI37 97 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 DEGS1O15121 323 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 CXCL13O43927 109 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 IGHEP01854 428 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 SOD3P08294 240 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 OR56B2PQ8NGI1 322 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 OR5A2Q8NGI9 324 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 OR2Y1Q8NGV0 311 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 FGFBP3Q8TAT2 258 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 NEK7Q8TDX7 302 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 CA5BP1Q8WTZ4 195 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 AKIRIN1Q9H9L7 192 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-232ENST00000557487 RPRMQ9NS64 109 aa13.92□□□□□ -0.18
SHMT2-232ENST00000557487 G3V3Y1 287 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 PEAR1Q5VY43 1037 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-232ENST00000557487 ZNF324BQ6AW86 544 aaPredicted RBP13.91□□□□□ -0.18
SHMT2-232ENST00000557487 PCSK4Q6UW60 755 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 P4HA3Q7Z4N8 544 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 OR10D3Q8NH80 312 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 OR10J5Q8NHC4 309 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 FRZBQ92765 325 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 LRFN1Q9P244 771 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 TIMM9Q9Y5J7 89 aa13.91□□□□□ -0.18
SHMT2-232ENST00000557487 IGKV1-6A0A0C4DH72 117 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 PHOX2AO14813 284 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 SYNGR2O43760 224 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 KLF7O75840 302 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 TRA2AQ13595 282 aaKnown RBP eCLIP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 LBHQ53QV2 105 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 TMEM41BQ5BJD5 291 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 DBX2Q6ZNG2 339 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 MRPL21Q7Z2W9 205 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 REC114Q7Z4M0 266 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 ZNF525Q8N782 197 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 MRPL30Q8TCC3 161 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 APOBEC3DQ96AK3 386 aaPredicted RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 HIST1H2AAQ96QV6 131 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 STRADBQ9C0K7 418 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 CDH20Q9HBT6 801 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 ABCA7Q8IZY2 2146 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 EML6Q6ZMW3 1958 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 FAM90A26D6RGX4 464 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 MDH2P40926 338 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 TCEAL6Q6IPX3 200 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 MOB1BQ7L9L4 216 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 YRDCQ86U90 279 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 TGIF2LYQ8IUE0 185 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 RNASE11Q8TAA1 199 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 RNASEH2CQ8TDP1 164 aaKnown RBP13.9□□□□□ -0.18
SHMT2-232ENST00000557487 SAP25Q8TEE9 199 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 S100PBPQ96BU1 408 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 SRD5A3Q9H8P0 318 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 NAT8Q9UHE5 227 aa13.9□□□□□ -0.18
SHMT2-232ENST00000557487 TNRC6BQ9UPQ9 1833 aaKnown RBP13.89□□□□□ -0.19
SHMT2-232ENST00000557487 IGKV3D-15A0A087WSY6 115 aa13.89□□□□□ -0.19
SHMT2-232ENST00000557487 SMCO3A2RU48 225 aa13.89□□□□□ -0.19
SHMT2-232ENST00000557487 ZFP92A6NM28 416 aa13.89□□□□□ -0.19
SHMT2-232ENST00000557487 CD300LBA8K4G0 201 aa13.89□□□□□ -0.19
SHMT2-232ENST00000557487 DVL1O14640 695 aa13.89□□□□□ -0.19
SHMT2-232ENST00000557487 LYSMD4Q5XG99 296 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms