RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 SLC22A13Q9Y226 551 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 PIGLQ9Y2B2 252 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 KLHDC2Q9Y2U9 406 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 ARL2BPQ9Y2Y0 163 aa4.62□□□□□ -1.67
VPS33B-207ENST00000557470 A0A0U1RQV5 110 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 PQLC2LA1A4F0 135 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 WRBO00258 174 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 CIDEAO60543 219 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 RAMP3O60896 148 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 SNAPINO95295 136 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 NRASP01111 189 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 IFNGP01579 166 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 HTR1DP28221 377 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 BRS3P32247 399 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 MYCNOSP40205 109 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 RPL5P46777 297 aaKnown RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 OR3A4PP47883 348 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 NPBWR1P48145 328 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 P2RX3P56373 397 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 RAB25P57735 213 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 PSME3P61289 254 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 ERVK11-1P61568 191 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 DYRK1AQ13627 763 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 EDDM3AQ14507 147 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 LBHQ53QV2 105 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 SAMD4BQ5PRF9 694 aaKnown RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 KCTD18Q6PI47 426 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 BAIAP2L2Q6UXY1 529 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 GDPD3Q7L5L3 318 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 IQCF1Q8N6M8 205 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 TPRX1Q8N7U7 411 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 AQP11Q8NBQ7 271 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 KLHL30-AS1Q8NEE0 82 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 LHFPL5Q8TAF8 219 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 OR51E1Q8TCB6 317 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 CHPT1Q8WUD6 406 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 THEM6Q8WUY1 208 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 FCGR1BQ92637 280 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 STMN2Q93045 179 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 OTULINQ96BN8 352 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 NOL4LQ96MY1 436 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF184Q99676 751 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 CLEC7AQ9BXN2 247 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 OR51V1Q9H2C8 321 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM133Q9H2Q1 129 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 ZCCHC4Q9H5U6 513 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 EFCAB1Q9HAE3 211 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 SPAG4Q9NPE6 437 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 IL1RAPQ9NPH3 570 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 GPR84Q9NQS5 396 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 ZC4H2Q9NQZ6 224 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 CMC2Q9NRP2 79 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 FAM206AQ9NX38 181 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 CNOT2Q9NZN8 540 aaKnown RBP4.61□□□□□ -1.67
VPS33B-207ENST00000557470 MGAT4CQ9UBM8 478 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 GPR132Q9UNW8 380 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 BAIAP2Q9UQB8 552 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 POLDIP2Q9Y2S7 368 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 LINC00312Q9Y6C7 94 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 SACSQ9NZJ4 4579 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
VPS33B-207ENST00000557470 DSCAML1Q8TD84 2053 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM269A0A1B0GVZ9 245 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 hADV38S2A0JD32 116 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 EFCAB10A6NFE3 127 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 F8VVB4 439 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 F8VWA3 439 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 M0QZK8 103 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TNFRSF11BO00300 401 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ARPC2O15144 300 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 LANCL1O43813 399 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 WBP4O75554 376 aaKnown RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 KRT36O76013 467 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 CCNB2O95067 398 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 IGLV3-1P01715 115 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 T-ENOLP0DO92 83 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 MPZP25189 248 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 CHATP28329 748 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 SLC6A1P30531 599 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 HMGA2P52926 109 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 HCCSP53701 268 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 SUMO2P61956 95 aaKnown RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 BDH1Q02338 343 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 MEF2CQ06413 473 aaPredicted RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 MFGE8Q08431 387 aaPredicted RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 LRRC36Q1X8D7 754 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF829Q3KNS6 432 aaPredicted RBP4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF684Q5T5D7 378 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 PRAMEF5Q5TYX0 476 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM268Q5VZI3 342 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 TMEM42Q69YG0 159 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ASRGL1Q7L266 308 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ANGPTL5Q86XS5 388 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF695Q8IW36 515 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 SLC38A6Q8IZM9 456 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ABHD12Q8N2K0 398 aa4.6□□□□□ -1.67
VPS33B-207ENST00000557470 ZNF680Q8NEM1 530 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms