RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 RPL35AP18077 110 aaKnown RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 GSSP48637 474 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 CYLC2Q14093 348 aaPredicted RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 Q6P435 159 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 Q6ZTC4 211 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 NR2C2APQ86WQ0 139 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 BVESQ8NE79 360 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 OR2T12Q8NG77 320 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 OR51T1Q8NGJ9 327 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 OR14K1Q8NGZ2 314 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 FRZBQ92765 325 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF503Q96F45 646 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 SH3GL1Q99961 368 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 ROPN1BQ9BZX4 212 aaPredicted RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 ROPN1Q9HAT0 212 aaPredicted RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 TECRQ9NZ01 308 aaKnown RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 NDUFAF4Q9P032 175 aa6.87□□□□□ -1.31
NEDD1-211ENST00000557454 NUFIP1Q9UHK0 495 aaKnown RBP6.87□□□□□ -1.31
NEDD1-211ENST00000557454 AGRNO00468 2067 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 IGHV3-43A0A0B4J1X8 118 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 A0A0B4J203 849 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 TRAV10A0A0B4J240 114 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 C2orf70A6NJV1 201 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 FCN1O00602 326 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 NDUFA3O95167 84 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 CYB5AP00167 134 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 IFNA10P01566 189 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 IGHV3-43DP0DP04 118 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 NUDT2P50583 147 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 FUT6P51993 359 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF137PP52743 207 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 SLC25A48Q6ZT89 311 aaKnown RBP6.86□□□□□ -1.31
NEDD1-211ENST00000557454 LINC00596Q86U02 117 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 TCEANCQ8N8B7 351 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 C8orf31Q8N9H6 132 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 CHST4Q8NCG5 386 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 NPBQ8NG41 125 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 OR11H2Q8NH07 326 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 RP9Q8TA86 221 aaKnown RBP6.86□□□□□ -1.31
NEDD1-211ENST00000557454 CACNG8Q8WXS5 425 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 BORCS8Q96FH0 119 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 CCDC28BQ9BUN5 200 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 SPAG4Q9NPE6 437 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 GTF2A1LQ9UNN4 478 aa6.86□□□□□ -1.31
NEDD1-211ENST00000557454 FAM32AQ9Y421 112 aaKnown RBP6.86□□□□□ -1.31
NEDD1-211ENST00000557454 A0A1B0GTI1 187 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 BMPR1BO00238 502 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 SDCBPO00560 298 aaPredicted RBP6.85□□□□□ -1.31
NEDD1-211ENST00000557454 HLA-DMBP28068 263 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 TSPAN31Q12999 210 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 PLGLAQ15195 96 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 ANKRD55Q3KP44 614 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF57Q68EA5 555 aaPredicted RBP6.85□□□□□ -1.31
NEDD1-211ENST00000557454 UBE2DNLQ8IWF7 75 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 OTULINQ96BN8 352 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 SSBP4Q9BWG4 385 aaPredicted RBP6.85□□□□□ -1.31
NEDD1-211ENST00000557454 INTS9Q9NV88 658 aaKnown RBP6.85□□□□□ -1.31
NEDD1-211ENST00000557454 GFOD1Q9NXC2 390 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 MDFICQ9P1T7 246 aa6.85□□□□□ -1.31
NEDD1-211ENST00000557454 IGKV1-12A0A0C4DH73 117 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 PRR32B1ATL7 298 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 H3BUA1 57 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 DEGS1O15121 323 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 IGKV1D-12P01611 117 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 ADMP35318 185 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 RPS16P62249 146 aaKnown RBP6.84□□□□□ -1.31
NEDD1-211ENST00000557454 ZNF829Q3KNS6 432 aaPredicted RBP6.84□□□□□ -1.31
NEDD1-211ENST00000557454 PAN3Q58A45 887 aaKnown RBP6.84□□□□□ -1.31
NEDD1-211ENST00000557454 RSBN1Q5VWQ0 802 aaPredicted RBP6.84□□□□□ -1.31
NEDD1-211ENST00000557454 OR5T1Q8NG75 326 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 PLPPR1Q8TBJ4 325 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 SNAPC3Q92966 411 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 CLCC1Q96S66 551 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 MRPL20Q9BYC9 149 aaKnown RBP6.84□□□□□ -1.31
NEDD1-211ENST00000557454 TTTY10Q9BZA0 68 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 OR51V1Q9H2C8 321 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
NEDD1-211ENST00000557454 DHRS7CA6NNS2 312 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 RIIAD1A6NNX1 92 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 RRHO14718 337 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 RGS16O15492 202 aaPredicted RBP6.83□□□□□ -1.32
NEDD1-211ENST00000557454 LANCL1O43813 399 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 GATBO75879 557 aaKnown RBP6.83□□□□□ -1.32
NEDD1-211ENST00000557454 S1PR2O95136 353 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 IFNGP01579 166 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 CD74P04233 296 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF3P17036 446 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 ALOX5APP20292 161 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 AADACP22760 399 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 ZNF134P52741 427 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 HCCSP53701 268 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 CDK5R1Q15078 307 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 BCL2L15Q5TBC7 163 aa6.83□□□□□ -1.32
NEDD1-211ENST00000557454 RPL13AP3Q6NVV1 102 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms