RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PKIBQ9C010 78 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 EXOSC4Q9NPD3 245 aaKnown RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 SIRT7Q9NRC8 400 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 RBFOX1Q9NWB1 397 aaKnown RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
ATXN3-243ENST00000556671 NUP50Q9UKX7 468 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 BLOC1S6Q9UL45 172 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 JMJD1CQ15652 2540 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
ATXN3-243ENST00000556671 NSD1Q96L73 2696 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 hCG_1809904A0A1W2PP81 198 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 A0A1W2PPE2 198 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 A0A1W2PR64 198 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 FAM90A7PA6NKC0 464 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 FAM90A22PA8MWA6 464 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 FAM90A12PA8MX19 464 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 FAM90A23PA8MXZ1 464 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PAHP00439 452 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CRYBA1P05813 215 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CPT2P23786 658 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 COX7A1P24310 79 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CRHBPP24387 322 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CFHR2P36980 270 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PTGFRP43088 359 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 OR3A4PP47883 348 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 RPL31P62899 125 aaKnown RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 AESQ08117 197 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 KLRD1Q13241 179 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 DYNC1I2Q13409 638 aaKnown RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 INSL4Q14641 139 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 LTC4SQ16873 150 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 SLC22A6Q4U2R8 563 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 YIF1BQ5BJH7 314 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 STUMQ69YW2 141 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 DMKNQ6E0U4 476 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 Q8IYB0 196 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PNKDQ8N490 385 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PARP16Q8N5Y8 322 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TPRX1Q8N7U7 411 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 OR4S1Q8NGB4 309 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 OR51A2Q8NGJ7 313 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TMEM158Q8WZ71 300 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 C12orf43Q96C57 262 aaKnown RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 SMIM19Q96E16 107 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 CPNE2Q96FN4 548 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 ZNF184Q99676 751 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 DCTN5Q9BTE1 182 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 SUCNR1Q9BXA5 334 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 ANKRD60Q9BZ19 345 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 DNTTIP1Q9H147 329 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PPA2Q9H2U2 334 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 BANF2Q9H503 90 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 NOX4Q9NPH5 578 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TMEM138Q9NPI0 162 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PCDHB16Q9NRJ7 776 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 PPP1R14DQ9NXH3 145 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 IL36RNQ9UBH0 155 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 KAAG1Q9UBP8 84 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 OPN4Q9UHM6 478 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 MRPS28Q9Y2Q9 187 aaKnown RBP3.81□□□□□ -1.8
ATXN3-243ENST00000556671 MAB21L2Q9Y586 359 aa3.81□□□□□ -1.8
ATXN3-243ENST00000556671 TRAV8-7A0A075B6U6 113 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 TRAV39A0A0B4J263 110 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 IGKV1-12A0A0C4DH73 117 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 CENPVL3A0A0U1RRI6 287 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 SMIM31A0A1B0GVY4 71 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 MEIOCA2RUB1 952 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 FUOMA2VDF0 154 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 GAGE10A6NGK3 116 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 A8MXK9 166 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 K7N7A8 449 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 GABRPO00591 440 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 DENRO43583 198 aaKnown RBP3.8□□□□□ -1.8
ATXN3-243ENST00000556671 NOS1APO75052 506 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-243ENST00000556671 FCN3O75636 299 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 KDM4BO94953 1096 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 VENTXO95231 258 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 FSTL3O95633 263 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 OR2H2O95918 312 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 IL1AP01583 271 aa3.8□□□□□ -1.8
ATXN3-243ENST00000556671 IGKV1D-12P01611 117 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms