RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 TMEM69Q5SWH9 247 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 HCP5Q6MZN7 132 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 ZNF880Q6PDB4 577 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 UBALD1Q8TB05 177 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 C22orf15Q8WYQ4 148 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 SUCNR1Q9BXA5 334 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 SETD2Q9BYW2 2564 aaPredicted RBP11.55□□□□□ -0.56
SNX6-206ENST00000556162 TMEM235A6NFC5 223 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 FAM25AB3EWG3 89 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 FAM25CB3EWG5 89 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 FAM25GB3EWG6 89 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 RGS5O15539 181 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 HBZP02008 142 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 ELK1P19419 428 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 GDNFP39905 211 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 GNG2P59768 71 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 IZUMO1Q8IYV9 350 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 ABHD12Q8N2K0 398 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 DTX3Q8N9I9 347 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 DCUN1D5Q9BTE7 237 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 CLEC7AQ9BXN2 247 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 SLIRPQ9GZT3 109 aaKnown RBP11.55□□□□□ -0.56
SNX6-206ENST00000556162 Q9N2K0 584 aa11.55□□□□□ -0.56
SNX6-206ENST00000556162 ELF5Q9UKW6 265 aaPredicted RBP11.55□□□□□ -0.56
SNX6-206ENST00000556162 IGHV2-26A0A0B4J1V2 119 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 NPFFO15130 113 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 LGALS4P56470 323 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 C9orf139Q6ZV77 190 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 OR52M1Q8NGK5 317 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 OR1L1Q8NH94 360 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 GALMQ96C23 342 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
SNX6-206ENST00000556162 A0A087X0M5 115 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 A0A1B0GX30 115 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 MEIOCA2RUB1 952 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 FAM172BPA6NC97 362 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 F2RL2O00254 374 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 SDCBPO00560 298 aaPredicted RBP11.53□□□□□ -0.56
SNX6-206ENST00000556162 CTDSP2O14595 271 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 ARG1P05089 322 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 MELTFP08582 738 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 FCGR3AP08637 254 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 HMGN3Q15651 99 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 MIDNQ504T8 468 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 Q6ZPA2 131 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 BCL6BQ8N143 479 aaPredicted RBP11.53□□□□□ -0.56
SNX6-206ENST00000556162 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 C6orf62Q9GZU0 229 aaPredicted RBP11.53□□□□□ -0.56
SNX6-206ENST00000556162 OCEL1Q9H607 264 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 ADAM30Q9UKF2 790 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 MRPS7Q9Y2R9 242 aaKnown RBP11.53□□□□□ -0.56
SNX6-206ENST00000556162 TOR1AO14656 332 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 DTYMKP23919 212 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 CD34P28906 385 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 PRRX1P54821 245 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 TAS2R20P59543 309 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 NUDCD2Q8WVJ2 157 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 ZNF286AQ9HBT8 521 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 OR2S2Q9NQN1 319 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 ZNF230Q9UIE0 474 aaPredicted RBP11.53□□□□□ -0.56
SNX6-206ENST00000556162 FAM96BQ9Y3D0 163 aa11.53□□□□□ -0.56
SNX6-206ENST00000556162 IGHV3-43A0A0B4J1X8 118 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 TRDCB7Z8K6 153 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 IGHV3-43DP0DP04 118 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 SAA4P35542 130 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 KIR2DS4P43632 304 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 LOXL3P58215 753 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 HLA-DRB3P79483 266 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 HTD2P86397 168 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 KIR2DS1Q14954 304 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 SRSF7Q16629 238 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX6-206ENST00000556162 FOXB2Q5VYV0 432 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 C5orf24Q7Z6I8 188 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 OR9G1Q8NH87 305 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 ZNF596Q8TC21 504 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 IL1F10Q8WWZ1 152 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 SLC6A7Q99884 636 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 ST6GALNAC5Q9BVH7 336 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 GFOD1Q9NXC2 390 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 EXTL2Q9UBQ6 330 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 SOX21Q9Y651 276 aaPredicted RBP11.52□□□□□ -0.57
SNX6-206ENST00000556162 CUBNO60494 3623 aa11.52□□□□□ -0.57
SNX6-206ENST00000556162 IFNA2P01563 188 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 IGHV3-7P01780 117 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 RBMS3Q6XE24 437 aaKnown RBP11.51□□□□□ -0.57
SNX6-206ENST00000556162 LAX1Q8IWV1 398 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 MAFIPQ8WZ33 124 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 LEAP2Q969E1 77 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
SNX6-206ENST00000556162 MIXL1Q9H2W2 232 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 PSG11Q9UQ72 335 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 NF1P21359 2839 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 A0A0U1RQK1 487 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 ODF3BA8MYP8 253 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms