RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	ZNF735	P0CB33	412 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	COX6B1	P14854	86 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	NDUFB7	P17568	137 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	EGR1	P18146	543 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ANXA7	P20073	488 aa	Known RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ZBTB25	P24278	435 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	CEBPD	P49716	269 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	EDDM3B	P56851	147 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	FXYD4	P59646	89 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	RRAS2	P62070	204 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	AES	Q08117	197 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	MST1L	Q2TV78	715 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	LRRC10	Q5BKY1	277 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	TEX36	Q5VZQ5	186 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	DHRS11	Q6UWP2	260 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	RTN4RL2	Q86UN3	420 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	SGPP2	Q8IWX5	399 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	CMTM1	Q8IZ96	169 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	SLC38A6	Q8IZM9	456 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	FAM185A	Q8N0U4	392 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	MUC20	Q8N307	709 aa	Predicted RBP	4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	PRR18	Q8N4B5	295 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	CD177	Q8N6Q3	437 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	UXS1	Q8NBZ7	420 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ANGPTL6	Q8NI99	470 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	PLPPR1	Q8TBJ4	325 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	MARCH1	Q8TCQ1	289 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	IL1F10	Q8WWZ1	152 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	TOMM40L	Q969M1	308 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	GALM	Q96C23	342 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	RAB39B	Q96DA2	213 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	SDSL	Q96GA7	329 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	FAHD2A	Q96GK7	314 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	LURAP1	Q96LR2	239 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	CCL13	Q99616	98 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	PHB2	Q99623	299 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	NCOR1P1	Q9H4R4	102 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	TAF9B	Q9HBM6	251 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	OR6C3	Q9NZP0	311 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF581	Q9P0T4	197 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	LPAR3	Q9UBY5	353 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	KIF25	Q9UIL4	384 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF222	Q9UK12	451 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF221	Q9UK13	617 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	FLVCR2	Q9UPI3	526 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	LAMP3	Q9UQV4	416 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	CACNA1B	Q00975	2339 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	ESPL1	Q14674	2120 aa		4.64	□□□□□ -1.67
ATL1-208	ENST00000556067	COL6A6	A6NMZ7	2263 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	HEATR1	Q9H583	2144 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067		A0A1W2PPH5	198 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	hADV38S2	A0JD32	116 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ODAM	A1E959	279 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	C7orf66	A4D0T2	115 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	C19orf84	I3L1E1	186 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067		K7N7A8	449 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ADAM20	O43506	726 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	SLC22A5	O76082	557 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	PPY	P01298	95 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	HLA-A	P01891	365 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	CTSD	P07339	412 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	SCT	P09683	121 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	DAO	P14920	347 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	RCC1	P18754	421 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	LOX	P28300	417 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	CD34	P28906	385 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ERP29	P30040	261 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	RBMX	P38159	391 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	CEACAM6	P40199	344 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	OR3A1	P47881	315 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	MECP2	P51608	486 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	LUM	P51884	338 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	UCP3	P55916	312 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	P2RX3	P56373	397 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	MRPS11	P82912	194 aa	Known RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	CD83	Q01151	205 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	TLE4	Q04727	773 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	TMEM30B	Q3MIR4	351 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	SPRN	Q5BIV9	151 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	TMEM128	Q5BJH2	165 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	IGSF11	Q5DX21	431 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	STUM	Q69YW2	141 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF880	Q6PDB4	577 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF788	Q6ZQV5	615 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	LYG2	Q86SG7	212 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	SLC25A42	Q86VD7	318 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	GAPT	Q8N292	157 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNRF1	Q8ND25	227 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	OR13C8	Q8NGS7	320 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	COQ8A	Q8NI60	647 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF431	Q8TF32	576 aa	Predicted RBP	4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	CHAC2	Q8WUX2	184 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ARL11	Q969Q4	196 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	MOB3A	Q96BX8	217 aa		4.63	□□□□□ -1.67
ATL1-208	ENST00000556067	ZNF486	Q96H40	463 aa	Predicted RBP	4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms