RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GLRXP35754 106 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 MPV17P39210 176 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 GZMKP49863 264 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 NKX2-5P52952 324 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SELENOVP59797 346 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RAP2BP61225 183 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 ERVS71-1P61550 626 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RPS23P62266 143 aaKnown RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 TFF3Q07654 80 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 IL13RA2Q14627 380 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SURF2Q15527 256 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SRSF7Q16629 238 aaKnown RBP eCLIP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 FAM76BQ5HYJ3 339 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RGS7BPQ6MZT1 257 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 C11orf88Q6PI97 169 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RTN4RL2Q86UN3 420 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SCCPDHQ8NBX0 429 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 UXS1Q8NBZ7 420 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 MARCH1Q8TCQ1 289 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 NEK7Q8TDX7 302 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RND1Q92730 232 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 KIRREL1Q96J84 757 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 RADILQ96JH8 1075 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 DHRS9Q9BPW9 319 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 VKORC1Q9BQB6 163 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 MS4A7Q9GZW8 240 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SLC23A1Q9UHI7 598 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 GLS2Q9UI32 602 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 SH3BGRL2Q9UJC5 107 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 TINAGQ9UJW2 476 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 PAIP2BQ9ULR5 123 aaKnown RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 C14orf166Q9Y224 244 aaKnown RBP5.75□□□□□ -1.49
SLIRP-204ENST00000555890 NPTNQ9Y639 398 aa5.75□□□□□ -1.49
SLIRP-204ENST00000555890 COL7A1Q02388 2944 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 KIR2DS1A0A191URI9 304 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 FAM172BPA6NC97 362 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 OR2AT4A6NND4 320 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 CEACAM18A8MTB9 384 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 SDCBPO00560 298 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 SH2D1BO14796 132 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 SLC22A5O76082 557 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 TOX4O94842 621 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 HLA-AP01891 365 aaKnown RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 FAM157CP0CG43 387 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 OR5H8P0DN80 308 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 PGAM2P15259 253 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 PPP3CBP16298 524 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 AKR1C4P17516 323 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 CD34P28906 385 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 MDH2P40926 338 aaKnown RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 GLP1RP43220 463 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 KIR2DS4P43632 304 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 FAM27E3Q08E93 113 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 KIR2DS1Q14954 304 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 MPPED2Q15777 294 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 ALKBH6Q3KRA9 238 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 SPIN3Q5JUX0 258 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 LPCAT3Q6P1A2 487 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 Q6ZS49 121 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 LYG2Q86SG7 212 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 PEG10Q86TG7 708 aaKnown RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 LHFPL1Q86WI0 220 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 BATF2Q8N1L9 274 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 MUC20Q8N307 709 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 LINC00482Q8N8I6 264 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 TMEM185AQ8NFB2 350 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 OR2AK2Q8NG84 335 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 OR52B4Q8NGK2 314 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 ZFAND1Q8TCF1 268 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 CAPSLQ8WWF8 208 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 MAFIPQ8WZ33 124 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 GTF3AQ92664 365 aaKnown RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 PHB2Q99623 299 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 HDHD3Q9BSH5 251 aaPredicted RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 CHIAQ9BZP6 476 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 NGBQ9NPG2 151 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 RCC2Q9P258 522 aaKnown RBP5.74□□□□□ -1.49
SLIRP-204ENST00000555890 GPR132Q9UNW8 380 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 VSIG4Q9Y279 399 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 MEMO1Q9Y316 297 aa5.74□□□□□ -1.49
SLIRP-204ENST00000555890 A0A0B4J2A0 478 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 LOC102723971A0A1B0GUV8 181 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 PLSCR5A0PG75 271 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 C9orf170A2RU37 121 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 ZNF785A8K8V0 405 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 F5H5P2 479 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 F8VVB4 439 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 F8VWA3 439 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 H0YL77 283 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 GOSR2O14653 212 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 CDIPTO14735 213 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 HS3ST1O14792 307 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 NOS1APO75052 506 aaPredicted RBP5.73□□□□□ -1.49
SLIRP-204ENST00000555890 RHBDL1O75783 438 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 RGS11O94810 467 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 OR2A4O95047 310 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 NXPH2O95156 264 aa5.73□□□□□ -1.49
SLIRP-204ENST00000555890 DUS4LO95620 317 aaKnown RBP5.73□□□□□ -1.49
SLIRP-204ENST00000555890 IGHV3-13P01766 116 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms