RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FAM90A7PA6NKC0 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A22PA8MWA6 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A12PA8MX19 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A5PA8MXJ8 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A23PA8MXZ1 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 SNAPC5O75971 98 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 IGKV1D-12P01611 117 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 PMP2P02689 132 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A15PP0C7V4 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A13PP0C7W8 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A14PP0C7W9 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A24PP0C7X0 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 PPIAL4GP0DN37 164 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 AMY2BP19961 511 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 CHATP28329 748 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 NDUFA5Q16718 116 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 CEACAM21Q3KPI0 293 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 SCGB2B2Q4G0G5 96 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 C4orf46Q504U0 113 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 KLF17Q5JT82 389 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-214ENST00000554604 ZNF841Q6ZN19 808 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 SLC25A42Q86VD7 318 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM90A1Q86YD7 464 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 GCSAMQ8N6F7 178 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 SIGLECL1Q8N7X8 197 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 OR2AK2Q8NG84 335 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 OR5A2Q8NGI9 324 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 OR5H2Q8NGV7 314 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
SHMT2-214ENST00000554604 MRGPRFQ96AM1 343 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 HIST1H2AAQ96QV6 131 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 CHST6Q9GZX3 395 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 PLEKHJ1Q9NW61 149 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 PIPOXQ9P0Z9 390 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 VSIG4Q9Y279 399 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
SHMT2-214ENST00000554604 IGHV3OR16-10A0A075B7F0 116 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TRAV40A0A0B4J280 105 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 G3V3Q6 166 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 CDIPTO14735 213 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TMPRSS2O15393 492 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 ATP6V1G1O75348 118 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 LHBP01229 141 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 CSN2P05814 226 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 GSTT2P0CG29 244 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 MUC1P15941 1255 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-214ENST00000554604 DTYMKP23919 212 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 GABRR1P24046 479 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TAS2R31P59538 309 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 UBE2MP61081 183 aaKnown RBP10.28□□□□□ -0.76
SHMT2-214ENST00000554604 DHODHQ02127 395 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 Q5BKY6 102 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 SIGIRRQ6IA17 410 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 ELP2Q6IA86 826 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 WDR82Q6UXN9 313 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 C6orf201Q7Z4U5 140 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TMED4Q7Z7H5 227 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TMEM17Q86X19 198 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 C11orf53Q8IXP5 236 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-214ENST00000554604 C12orf45Q8N5I9 185 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-214ENST00000554604 OR2T35Q8NGX2 323 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 TERB2Q8NHR7 220 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 HPSE2Q8WWQ2 592 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 SCGB3A2Q96PL1 93 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 CTSZQ9UBR2 303 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 MGAT4AQ9UM21 535 aa10.28□□□□□ -0.76
SHMT2-214ENST00000554604 OR5B21A6NL26 309 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 OR2AT4A6NND4 320 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 C22orf46C9J442 243 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 RGS11O94810 467 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 PLATP00750 562 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 LIPFP07098 398 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 IGHV4-38-2P0DP08 117 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 EGR1P18146 543 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 ZBTB25P24278 435 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 SNU13P55769 128 aaKnown RBP10.27□□□□□ -0.77
SHMT2-214ENST00000554604 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
SHMT2-214ENST00000554604 GMFBP60983 142 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 FGF12P61328 243 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 DHRS2Q13268 280 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 GRK1Q15835 563 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 TAF9Q16594 264 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 NHLRC3Q5JS37 347 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 GPR157Q5UAW9 335 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 TEX36Q5VZQ5 186 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 LYG2Q86SG7 212 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 LHFPL1Q86WI0 220 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 CALHM1Q8IU99 346 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 OR11H4Q8NGC9 324 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 OR5AP2Q8NGF4 316 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 OR5P3Q8WZ94 311 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 PCGF1Q9BSM1 259 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 FGF23Q9GZV9 251 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-214ENST00000554604 ESM1Q9NQ30 184 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 DNAJB11Q9UBS4 358 aa10.27□□□□□ -0.77
SHMT2-214ENST00000554604 HSPB11Q9Y547 144 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms