RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 ST3GAL6Q9Y274 331 aa7.82□□□□□ -1.16
ACTN1-210ENST00000553779 IGHV3-43A0A0B4J1X8 118 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A18PA6NE21 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A16PA6NEW6 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A20PA6NIJ5 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A9PA6NNJ1 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A12PA8MX19 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A5PA8MXJ8 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 AIPO00170 330 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 ZFPL1O95159 310 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 IGHG2P01859 326 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 RPLP1P05386 114 aaKnown RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A15PP0C7V4 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A13PP0C7W8 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A14PP0C7W9 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 FAM90A24PP0C7X0 464 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 IGHV3-43DP0DP04 118 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 MYF6P23409 242 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 SNRPGP62308 76 aaKnown RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 RGS21Q2M5E4 152 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 DDI2Q5TDH0 399 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 RSBN1Q5VWQ0 802 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 ELP2Q6IA86 826 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 TMEM65Q6PI78 240 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 TGIF2LXQ8IUE1 241 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 IZUMO1Q8IYV9 350 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 SYS1Q8N2H4 156 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 PRR18Q8N4B5 295 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 PARP16Q8N5Y8 322 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 S100ZQ8WXG8 99 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 EAF1Q96JC9 268 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 P2RX4Q99571 388 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 NCOR1P1Q9H4R4 102 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 ISG20L2Q9H9L3 353 aaKnown RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 LIN7CQ9NUP9 197 aaKnown RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 GNG12Q9UBI6 72 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 CKLFQ9UBR5 152 aa7.81□□□□□ -1.16
ACTN1-210ENST00000553779 SIRT4Q9Y6E7 314 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-210ENST00000553779 SPINT2O43291 252 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 TXNL1O43396 289 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 CDRT1O95170 752 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 MOSP00540 346 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ALPLP05186 524 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 OR5H8P0DN80 308 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 GZMHP20718 246 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 SOX6P35712 828 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF93P35789 620 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ALDH3A2P51648 485 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 RBM11P57052 281 aaKnown RBP7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF816Q0VGE8 651 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-210ENST00000553779 FOXE3Q13461 319 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 LINC00596Q86U02 117 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 OR52N1Q8NH53 320 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 GPR148Q8TDV2 347 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ISOC1Q96CN7 298 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 C9orf16Q9BUW7 83 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 JAM3Q9BX67 310 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ERVK13-1Q9NX77 482 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 AASSQ9UDR5 926 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 TRAPPC2LQ9UL33 140 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 ERGIC3Q9Y282 383 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 EXOGQ9Y2C4 368 aaKnown RBP7.8□□□□□ -1.16
ACTN1-210ENST00000553779 TNCP24821 2201 aa7.8□□□□□ -1.16
ACTN1-210ENST00000553779 NPIPB11E5RHQ5 1161 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 J3QRE1 110 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 GEMIN2O14893 280 aaKnown RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 SLC22A1O15245 554 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ELANEP08246 267 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 SLC2A2P11168 524 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 BDKRB2P30411 391 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 RAB40BQ12829 278 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF846Q147U1 533 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF260Q3ZCT1 412 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 SLC22A6Q4U2R8 563 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 SLC25A30Q5SVS4 291 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 C6orf183Q5T699 404 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 TMPRSS11AQ6ZMR5 421 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 CLVS1Q8IUQ0 354 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 CBR4Q8N4T8 237 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 Q8NFD4 153 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 OR10V1Q8NGI7 309 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 OR51A2Q8NGJ7 313 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 RTN4IP1Q8WWV3 396 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 TMEM106AQ96A25 262 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ASCL2Q99929 193 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ABCG5Q9H222 651 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 SPACA1Q9HBV2 294 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 AMBNQ9NP70 447 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 TMEM138Q9NPI0 162 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF107Q9UII5 783 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 RPL36Q9Y3U8 105 aaKnown RBP7.79□□□□□ -1.16
ACTN1-210ENST00000553779 hCG_2014768A0A024R1R8 64 aa7.78□□□□□ -1.16
ACTN1-210ENST00000553779 MCRIP1C9JLW8 97 aa7.78□□□□□ -1.16
ACTN1-210ENST00000553779 E9PI62 339 aa7.78□□□□□ -1.16
ACTN1-210ENST00000553779 ZNF780AO75290 641 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-210ENST00000553779 OR8U8P0C7N1 319 aa7.78□□□□□ -1.16
ACTN1-210ENST00000553779 CGB3P0DN86 165 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms