RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 HBZP02008 142 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 GSTP1P09211 210 aaKnown RBP11.28□□□□□ -0.6
TUBB3-202ENST00000553656 CD34P28906 385 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 GDNFP39905 211 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 PRRX1P54821 245 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 GNG2P59768 71 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 SPCS2Q15005 226 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 CDNFQ49AH0 187 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 KIAA2026Q5HYC2 2103 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 OLFML2AQ68BL7 652 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 ZNF626Q68DY1 528 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 OR9G1Q8NH87 305 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 UBALD1Q8TB05 177 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 GNG12Q9UBI6 72 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 TBL2Q9Y4P3 447 aaKnown RBP11.28□□□□□ -0.6
TUBB3-202ENST00000553656 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
TUBB3-202ENST00000553656 TRAV18A0A075B6X5 111 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 A0A087X0M5 115 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 A0A1B0GX30 115 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 MNDAP41218 407 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 GNG10P50151 68 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 PITPNAQ00169 270 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 BAMBIQ13145 260 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 HMGN3Q15651 99 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 MINOS1Q5TGZ0 78 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 IL1F10Q8WWZ1 152 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 CREB3L1Q96BA8 519 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 GALMQ96C23 342 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 ABCG5Q9H222 651 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF286AQ9HBT8 521 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.27□□□□□ -0.61
TUBB3-202ENST00000553656 CCDC59Q9P031 241 aaKnown RBP11.27□□□□□ -0.61
TUBB3-202ENST00000553656 KCNK7Q9Y2U2 307 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
TUBB3-202ENST00000553656 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
TUBB3-202ENST00000553656 MINOS1-NBL1R4GNA1 71 aa11.27□□□□□ -0.61
TUBB3-202ENST00000553656 SMIM31A0A1B0GVY4 71 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 BTBD17A6NE02 478 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 TMEM235A6NFC5 223 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 F2RL2O00254 374 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 APOA1P02647 267 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 HTR1DP28221 377 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 CEACAM3P40198 252 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 HILS1P60008 231 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 PNLIPRP3Q17RR3 467 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 TMEM69Q5SWH9 247 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 LEAP2Q969E1 77 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 CMTM3Q96MX0 182 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
TUBB3-202ENST00000553656 Q9N2K0 584 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 OR2S2Q9NQN1 319 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 GFOD1Q9NXC2 390 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
TUBB3-202ENST00000553656 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
TUBB3-202ENST00000553656 IGHV3-43A0A0B4J1X8 118 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 FAM25AB3EWG3 89 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 FAM25CB3EWG5 89 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 FAM25GB3EWG6 89 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 XRCC3O43542 346 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 RGS11O94810 467 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 IGHV3-7P01780 117 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 FCGR3AP08637 254 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 ARHGDIBP52566 201 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 HTD2P86397 168 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF260Q3ZCT1 412 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 STEAP3Q658P3 488 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 Q6YL49 198 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 PRIMA1Q86XR5 153 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 OR10X1Q8NGY0 326 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 MMP28Q9H239 520 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 DPAGT1Q9H3H5 408 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 ADAM30Q9UKF2 790 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 PSG11Q9UQ72 335 aa11.25□□□□□ -0.61
TUBB3-202ENST00000553656 LEUTXA8MZ59 168 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 TRIM77I1YAP6 450 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 J3QR06 171 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
TUBB3-202ENST00000553656 RGS5O15539 181 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 HSPA12AO43301 675 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 HPGDSO60760 199 aa11.24□□□□□ -0.61
TUBB3-202ENST00000553656 EIF4EP06730 217 aaKnown RBP11.24□□□□□ -0.61
TUBB3-202ENST00000553656 DTYMKP23919 212 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms