RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 RDH5Q92781 318 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 MRPL24Q96A35 216 aaKnown RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 RRNAD1Q96FB5 475 aaKnown RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 CCDC120Q96HB5 630 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 AKR1E2Q96JD6 320 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF488Q96MN9 340 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 TMEM222Q9H0R3 208 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 OR51B6Q9H340 312 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 NCOR1P1Q9H4R4 102 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DUX4Q9UBX2 424 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 FBXO9Q9UK97 447 aaPredicted RBP5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 MSRB2Q9Y3D2 182 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 OR2W1Q9Y3N9 320 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 SPEF1Q9Y4P9 236 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 DYSFO75923 2080 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 BSNQ9UPA5 3926 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 CADP27708 2225 aa5.07□□□□□ -1.6
VIPAS39-204ENST00000553576 HCFC1P51610 2035 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 IGLV3-9A0A075B6K5 115 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 IGKV1D-13A0A0B4J2D9 117 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 C3orf85A0A1B0GTC6 90 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 A8MXK9 166 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 E5RGE8 158 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 F5H0A9 414 aaPredicted RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 NXPH2O95156 264 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 GAPDHP04406 335 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 FGF2P09038 288 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 IGKV1-13P0DP09 117 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 GLI4P10075 376 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 TPT1P13693 172 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 MMP9P14780 707 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF44P15621 663 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 FXYD4P59646 89 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 EIF5AP63241 154 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 SNTB1Q13884 538 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 TBR1Q16650 682 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 CR1LQ2VPA4 569 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 GPR157Q5UAW9 335 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM180AQ6UWF9 173 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ALKAL2Q6UX46 152 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 WDR82Q6UXN9 313 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF818PQ6ZRF7 136 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 LYZL2Q7Z4W2 148 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 MRGPRGQ86SM5 289 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 COMMD7Q86VX2 200 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 DOLPP1Q86YN1 238 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 BAP18Q8IXM2 172 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 CMTM1Q8IZ96 169 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 SELENOHQ8IZQ5 122 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF565Q8N9K5 539 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ZBTB34Q8NCN2 500 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OR5T2Q8NGG2 359 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OR5D13Q8NGL4 314 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OR4D5Q8NGN0 318 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OR10J5Q8NHC4 309 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 PLPPR1Q8TBJ4 325 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 NEK7Q8TDX7 302 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM216AQ8WUB2 273 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 RBPMSQ93062 196 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 TOMM40LQ969M1 308 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 MUCL1Q96DR8 90 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 TP53RKQ96S44 253 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF471Q9BX82 626 aaPredicted RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 C1QTNF6Q9BXI9 259 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ARV1Q9H2C2 271 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 C11orf1Q9H5F2 150 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM212BQ9NTI7 297 aaPredicted RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 ELOVL5Q9NYP7 299 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 PRR13Q9NZ81 148 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OR5AC2Q9NZP5 309 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 JKAMPQ9P055 326 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 TINAGQ9UJW2 476 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 NSG2Q9Y328 171 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 USF3Q68DE3 2245 aa5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 DIDO1Q9BTC0 2240 aaKnown RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 PTPRZ1P23471 2315 aaPredicted RBP5.06□□□□□ -1.6
VIPAS39-204ENST00000553576 OOEPA6NGQ2 149 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 NUDT19A8MXV4 375 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SRRM5B3KS81 715 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 H0Y980 276 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 K7EPK0 472 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 BET1O15155 118 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 ST8SIA3O43173 380 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 PHF1O43189 567 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 TIMM8AO60220 97 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 PGLYRP1O75594 196 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 JTBO76095 146 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 ZNF205O95201 554 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 SPDEFO95238 335 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 HAND1O96004 215 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 LHBP01229 141 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 CRYAAP02489 173 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 MBPP02686 304 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 GRPP07492 148 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 FAM157CP0CG43 387 aa5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 RCC1P18754 421 aaPredicted RBP5.05□□□□□ -1.6
VIPAS39-204ENST00000553576 VDAC1P21796 283 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms