RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SPHARQ15513 63 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 C11orf88Q6PI97 169 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 TMEM91Q6ZNR0 172 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 CEACAM19Q7Z692 300 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 LINC00596Q86U02 117 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF329Q86UD4 541 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 ZNF439Q8NDP4 499 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 OR52L2PQ8NGH6 319 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 OR10X1Q8NGY0 326 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 SULT4A1Q9BR01 284 aa14.46□□□□□ -0.09
SHMT2-206ENST00000553529 NOTCH1P46531 2555 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 IGHV1-3A0A0C4DH29 117 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MCRIP1C9JLW8 97 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 SC5DO75845 299 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 HBZP02008 142 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 HSMCR30P0CW71 290 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 TMEM11P17152 192 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MYF6P23409 242 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 PLA2G7Q13093 441 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MADCAM1Q13477 382 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 GPR50Q13585 617 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 P2RY14Q15391 338 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 BEAN1Q3B7T3 259 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 SAMD5Q5TGI4 173 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MOB3BQ86TA1 216 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 C5orf56Q8N8D9 126 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MRPL30Q8TCC3 161 aaKnown RBP14.45□□□□□ -0.1
SHMT2-206ENST00000553529 MYDGFQ969H8 173 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 VCXQ9H320 206 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 TRAPPC2LQ9UL33 140 aa14.45□□□□□ -0.1
SHMT2-206ENST00000553529 CCRL2O00421 344 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 ZNF780AO75290 641 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-206ENST00000553529 HTR2CP28335 458 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 MNDAP41218 407 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 CD83Q01151 205 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 CT45A1Q5HYN5 189 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 IZUMO2Q6UXV1 221 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 C6orf201Q7Z4U5 140 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 NDUFA11Q86Y39 141 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 CT45A3Q8NHU0 189 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 MOB4Q9Y3A3 225 aa14.44□□□□□ -0.1
SHMT2-206ENST00000553529 AMMECR1Q9Y4X0 333 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-206ENST00000553529 H0YHG0 523 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 CLDN12P56749 244 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 RNLSQ5VYX0 342 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 CENPVQ7Z7K6 275 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-206ENST00000553529 GAPTQ8N292 157 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 NKAIN3Q8N8D7 197 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 ST6GALNAC6Q969X2 333 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 CNBD2Q96M20 576 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 HDHD3Q9BSH5 251 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-206ENST00000553529 FAAP24Q9BTP7 215 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 ANKRD60Q9BZ19 345 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 CCDC90BQ9GZT6 254 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 DUSP21Q9H596 190 aa14.43□□□□□ -0.1
SHMT2-206ENST00000553529 AK6Q9Y3D8 172 aaKnown RBP14.43□□□□□ -0.1
SHMT2-206ENST00000553529 OOSP1A8MZH6 123 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 ORC5O43913 435 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 GZMHP20718 246 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 CRHBPP24387 322 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 QRFPP83859 136 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 ZNF816Q0VGE8 651 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-206ENST00000553529 GPR176Q14439 515 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 KHDC1LQ5JSQ8 128 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 CCDC144NLQ6NUI1 221 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 LCNL1Q6ZST4 164 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 C16orf82Q7Z2V1 217 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 OR10A7Q8NGE5 316 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 RTN4IP1Q8WWV3 396 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-206ENST00000553529 CREB3L1Q96BA8 519 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 EAF1Q96JC9 268 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-206ENST00000553529 PARP12Q9H0J9 701 aaKnown RBP14.42□□□□□ -0.1
SHMT2-206ENST00000553529 TAF9BQ9HBM6 251 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 SCN3BQ9NY72 215 aa14.42□□□□□ -0.1
SHMT2-206ENST00000553529 TCRBV4S1A1TA0A5B7 111 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 RGS10O43665 173 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 PDCD6O75340 191 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 UCHL1P09936 223 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 FAM106CPP0CH98 169 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 SNRPBP14678 240 aaKnown RBP14.41□□□□□ -0.1
SHMT2-206ENST00000553529 IGLL1P15814 213 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 SRMP19623 302 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 FUT3P21217 361 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 MAPK3P27361 379 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-206ENST00000553529 CHATP28329 748 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 PPP1CCP36873 323 aaKnown RBP14.41□□□□□ -0.1
SHMT2-206ENST00000553529 FABP5Q01469 135 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 HSD17B12Q53GQ0 312 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 C1orf100Q5SVJ3 147 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 Q8N6K4 173 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 UFD1Q92890 307 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 RITA1Q96K30 269 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 UQCC2Q9BRT2 126 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 GNG12Q9UBI6 72 aa14.41□□□□□ -0.1
SHMT2-206ENST00000553529 SHISA3A0PJX4 238 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 SOCS1O15524 211 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 RAB7AP51149 207 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 ARHGDIBP52566 201 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 RPS27AP62979 156 aaKnown RBP14.4□□□□□ -0.1
SHMT2-206ENST00000553529 SSX1Q16384 188 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms