RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 PTGES3Q15185 160 aaKnown RBP3.64□□□□□ -1.83
SCFD1-208ENST00000553278 MRPL2Q5T653 305 aaKnown RBP3.64□□□□□ -1.83
SCFD1-208ENST00000553278 IGFL2Q6UWQ7 119 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 TCF23Q7RTU1 214 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 LRRC34Q8IZ02 419 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 KRT222Q8N1A0 295 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 MIR7-3HGQ8N6C7 128 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 Q8N7P7 452 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 Q8N9L7 120 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 OR1M1Q8NGA1 313 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 GPR32P1Q8NGA4 272 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 OR9I1Q8NGQ6 314 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 OR51H1Q8NH63 302 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 FRZBQ92765 325 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 REEP6Q96HR9 211 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 OR7D2Q96RA2 312 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 RTBDNQ9BSG5 229 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-208ENST00000553278 BCL2L14Q9BZR8 327 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 LINC00527Q9UJ94 153 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 DKKL1Q9UK85 242 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 RAB26Q9ULW5 256 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 CABIN1Q9Y6J0 2220 aa3.64□□□□□ -1.83
SCFD1-208ENST00000553278 SNAPC4Q5SXM2 1469 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 IZUMO1RA6ND01 250 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 ARGFXA6NJG6 315 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 ZNF850A8MQ14 1090 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 B4DEV8 164 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 F5H5P2 479 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 K7ERS5 55 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 TNNC2P02585 160 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 OR4A8P0C604 315 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 CXCL2P19875 107 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 TGFBR1P36897 503 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 MPV17P39210 176 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 GABARAPL2P60520 117 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 PFN3P60673 137 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 HPCAP84074 193 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 AESQ08117 197 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 TRMT12Q53H54 448 aaKnown RBP3.63□□□□□ -1.83
SCFD1-208ENST00000553278 N4BP2L1Q5TBK1 243 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-208ENST00000553278 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 NAA40Q86UY6 237 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 DOLPP1Q86YN1 238 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 GID4Q8IVV7 300 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 OR8S1Q8NH09 359 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 SPPL2BQ8TCT7 592 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 APOBEC3DQ96AK3 386 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-208ENST00000553278 OTUB2Q96DC9 234 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 IP6K3Q96PC2 410 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 C1orf50Q9BV19 199 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 FAM60AQ9NP50 221 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 HDGFL3Q9Y3E1 203 aa3.63□□□□□ -1.83
SCFD1-208ENST00000553278 LSM5Q9Y4Y9 91 aaKnown RBP3.63□□□□□ -1.83
SCFD1-208ENST00000553278 CHD2O14647 1828 aaKnown RBP3.63□□□□□ -1.83
SCFD1-208ENST00000553278 SCN1AP35498 2009 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 A8MU10 97 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 KRT75O95678 551 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 LHBP01229 141 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 TCRBP04435 133 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 PTHLHP12272 177 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 CCR7P32248 378 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 PSMB3P49720 205 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 IDH3GP51553 393 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-208ENST00000553278 LSM6P62312 80 aaKnown RBP3.62□□□□□ -1.83
SCFD1-208ENST00000553278 CCL7P80098 99 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 HIST3H3Q16695 136 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 MESTQ5EB52 335 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 LAIR2Q6ISS4 152 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 UNQ9165/PRO28630Q6UXU0 137 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 CYHR1Q6ZMK1 362 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 TMEM105Q8N8V8 129 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 TMEM161BQ8NDZ6 487 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 OR1P1Q8NH06 330 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 EEF1AKMT1Q8WVE0 214 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 RTN4IP1Q8WWV3 396 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-208ENST00000553278 TMA16Q96EY4 203 aaKnown RBP3.62□□□□□ -1.83
SCFD1-208ENST00000553278 GTSF1LQ9H1H1 148 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 INIPQ9NRY2 104 aa3.62□□□□□ -1.83
SCFD1-208ENST00000553278 PCM1Q15154 2024 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 C7orf66A4D0T2 115 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 LEUTXA8MZ59 168 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 H3BSA7 217 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 FBP1P09467 338 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 OR12D1P0DN82 309 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 MUC1P15941 1255 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-208ENST00000553278 HSD11B1P28845 292 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 DDTP30046 118 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 PMELP40967 661 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 RSU1Q15404 277 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 MMDQ15546 238 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 LCN8Q6JVE9 175 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 TIFABQ6ZNK6 161 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 Q6ZRU5 148 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 ZNF695Q8IW36 515 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 ASB17Q8WXJ9 295 aa3.61□□□□□ -1.83
SCFD1-208ENST00000553278 YIPF5Q969M3 257 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms