RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 AMIGO2Q86SJ2 522 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CATSPERDQ86XM0 798 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 ZNF573Q86YE8 665 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 LAX1Q8IWV1 398 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 NRMQ8IXM6 262 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 PACRGLQ8N7B6 248 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 GVQW1Q8N7I0 195 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 FAM86B1Q8N7N1 296 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 POC1AQ8NBT0 407 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 GPR32P1Q8NGA4 272 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 OR4D11Q8NGI4 311 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 OR2T10Q8NGZ9 312 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 OR56B4Q8NH76 319 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 TOMM40LQ969M1 308 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 OTULINQ96BN8 352 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 TPD52L3Q96J77 140 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 MS4A10Q96PG2 267 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 CIB1Q99828 191 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 FNDC11Q9BVV2 318 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 MFFQ9GZY8 342 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 TOLLIPQ9H0E2 274 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 KLK15Q9H2R5 256 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 NIPAL2Q9H841 368 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 LRRC42Q9Y546 428 aa3.91□□□□□ -1.78
CKAP4-203ENST00000553039 SRRM2Q9UQ35 2752 aaKnown RBP3.91□□□□□ -1.78
CKAP4-203ENST00000553039 hCG_38984A0A1B0GV85 526 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 UNC119BA6NIH7 251 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR5B21A6NL26 309 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 C16orf90A8MZG2 172 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR11H12B2RN74 326 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 EPM2AB3EWF7 344 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 G3V2T6 193 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 E2F6O75461 281 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 TXNDC12O95881 172 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SEMG1P04279 462 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 GAPDHP04406 335 aaKnown RBP3.9□□□□□ -1.79
CKAP4-203ENST00000553039 TFAP2AP05549 437 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SLC2A1P11166 492 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ANOS1P23352 680 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 CDK2P24941 298 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 HSD11B1P28845 292 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 CD34P28906 385 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ERP29P30040 261 aaKnown RBP3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SLC6A6P31641 620 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 MAGEA2P43356 314 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 AQP4P55087 323 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 CD81P60033 236 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SELENOWP63302 87 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 MADCAM1Q13477 382 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 FHL1Q13642 323 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 GAMTQ14353 236 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 IFI44LQ53G44 452 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR2T5Q6IEZ7 315 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF730Q6ZMV8 503 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 MOB3BQ86TA1 216 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF575Q86XF7 245 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ZDHHC21Q8IVQ6 265 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 CBR4Q8N4T8 237 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR2K2Q8NGT1 345 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR2T29Q8NH02 315 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR9G1Q8NH87 305 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 TAMM41Q96BW9 452 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 DAZAP1Q96EP5 407 aaKnown RBP3.9□□□□□ -1.79
CKAP4-203ENST00000553039 TSSK2Q96PF2 358 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 NEURL2Q9BR09 285 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OSBPL10Q9BXB5 764 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 REEP1Q9H902 201 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 PLEKHA3Q9HB20 300 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SEBOXQ9HB31 216 aaPredicted RBP3.9□□□□□ -1.79
CKAP4-203ENST00000553039 SLC25A19Q9HC21 320 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 IL1RAPQ9NPH3 570 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 OR6C3Q9NZP0 311 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 RAB26Q9ULW5 256 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 RABL2BQ9UNT1 228 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 TP53TG1Q9Y2A0 90 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 ORC6Q9Y5N6 252 aa3.9□□□□□ -1.79
CKAP4-203ENST00000553039 IGHV4OR15-8A0A075B7B6 117 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 A0A087WW49 117 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 LOC102724200A0A096LPH7 203 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 A0A0B4J293 547 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 MEX3AA1L020 520 aaKnown RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 FAM90A10PA6NDY2 464 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 DCTN6O00399 190 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 DLGAP1O14490 977 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 EI24O14681 340 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 IDH3BO43837 385 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 RLN1P04808 185 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 LGALS1P09382 135 aaKnown RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 CX3CR1P49238 355 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 CRYBA2P53672 197 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 TMEM267Q0VDI3 215 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 MED21Q13503 144 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 GK3PQ14409 553 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 EDDM3AQ14507 147 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 TRAM2Q15035 370 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 RBMS2Q15434 407 aaKnown RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 GRK1Q15835 563 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 Q6ZNX1 250 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 TMEM182Q6ZP80 229 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SLC16A12Q6ZSM3 486 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms