RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SPACA3Q8IXA5 215 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 OR1S2Q8NGQ3 325 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 NARFLQ9H6Q4 476 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 NUP50Q9UKX7 468 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 ZDHHC8Q9ULC8 765 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 SPEF1Q9Y4P9 236 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 DSPP15924 2871 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 CLEC18AA5D8T8 446 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 HSPA12AO43301 675 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 JTBO76095 146 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 CRYAAP02489 173 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 VDAC1P21796 283 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 CD200P41217 278 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 NMSQ5H8A3 153 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 CLEC18CQ8NCF0 446 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 OR2Z1Q8NG97 314 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 UBALD1Q8TB05 177 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 MARC2Q969Z3 335 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 AKR1E2Q96JD6 320 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 KCNIP1Q9NZI2 227 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 DUSP13Q9UII6 198 aa11.8□□□□□ -0.52
RAB3IP-216ENST00000552199 A8MXE2 369 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 ADAM20O43506 726 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 SCO1O75880 301 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 PTBP3O95758 552 aaKnown RBP11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 IGHV3-13P01766 116 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 GLRXP35754 106 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 CEACAM6P40199 344 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 NKX6-1P78426 367 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 GNMTQ14749 295 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 SMIM21Q3B7S5 101 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 SCNM1Q9BWG6 230 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 SMIM3Q9BZL3 60 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 PIGMQ9H3S5 423 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 ASF1BQ9NVP2 202 aa11.79□□□□□ -0.52
RAB3IP-216ENST00000552199 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 AESQ08117 197 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 TBR1Q16650 682 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 DOLPP1Q86YN1 238 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 MGAQ8IWI9 3026 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 PIGBOS1A0A0B4J2F0 54 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 OOEPA6NGQ2 149 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 PRRG2O14669 202 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 TFF1P04155 84 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 OR3A1P47881 315 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 COL10A1Q03692 680 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 C1QTNF12Q5T7M4 302 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 CLEC9AQ6UXN8 241 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 CISD2Q8N5K1 135 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 Q8NA96 180 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 OR51H1Q8NH63 302 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 COQ2Q96H96 371 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 PARP12Q9H0J9 701 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 LPAR3Q9UBY5 353 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 RBM7Q9Y580 266 aaKnown RBP11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 KIAA2026Q5HYC2 2103 aa11.78□□□□□ -0.52
RAB3IP-216ENST00000552199 ZSCAN5BA6NJL1 495 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 C12orf77C9JDV5 145 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 SERPINE2P07093 398 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 OR8U9P0C7N5 309 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 PSG2P11465 335 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 BMP5P22003 454 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 KLF3P57682 345 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 POLR2GP62487 172 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 ID3Q02535 119 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 STPG2Q8N412 459 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 OR10Z1Q8NGY1 313 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 OR8U1Q8NH10 309 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 OR1L1Q8NH94 360 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 GALMQ96C23 342 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 SAT2Q96F10 170 aaPredicted RBP11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 WFDC1Q9HC57 220 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.53
RAB3IP-216ENST00000552199 ZNF705EA8MWA4 302 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 K7ENP7 123 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 CFHR2P36980 270 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 SULT1A2P50226 295 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 MST1LQ2TV78 715 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 UQCC3Q6UW78 93 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
RAB3IP-216ENST00000552199 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms