RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 OR4C12Q96R67 309 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 CHCHD6Q9BRQ6 235 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 FAM107BQ9H098 131 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 PARP11Q9NR21 331 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 KIAA1456Q9P272 454 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 MYRFQ9Y2G1 1151 aa8.06□□□□□ -1.12
VPS29-208ENST00000550267 KIAA2026Q5HYC2 2103 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 IGHV3-43A0A0B4J1X8 118 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 TRAV41A0A0B4J266 112 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 FAM90A10PA6NDY2 464 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 NOTOA8MTQ0 251 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
VPS29-208ENST00000550267 SLC31A2O15432 143 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 SNX3O60493 162 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 SULT1C4O75897 302 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 MT-ND2P03891 347 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 OR2T7P0C7T2 308 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 IGHV3-43DP0DP04 118 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 TMEM225BP0DP42 221 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 ARSBP15848 533 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 PI3P19957 117 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 MTNR1BP49286 362 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 MNAT1P51948 309 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 SRSF3P84103 164 aaKnown RBP8.05□□□□□ -1.12
VPS29-208ENST00000550267 EFNB1P98172 346 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 TP53I3Q53FA7 332 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 TMEM244Q5VVB8 128 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 GID4Q8IVV7 300 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 OR10H4Q8NGA5 316 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 CASTOR1Q8WTX7 329 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 EME1Q96AY2 570 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 LRGUKQ96M69 825 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 IL4I1Q96RQ9 567 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 MBOAT4Q96T53 435 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 TOLLIPQ9H0E2 274 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 RETNQ9HD89 108 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 FAM118AQ9NWS6 357 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 CHCHD3Q9NX63 227 aaKnown RBP8.05□□□□□ -1.12
VPS29-208ENST00000550267 GNG8Q9UK08 70 aa8.05□□□□□ -1.12
VPS29-208ENST00000550267 HSPA12AO43301 675 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 LGALS1P09382 135 aaKnown RBP8.04□□□□□ -1.12
VPS29-208ENST00000550267 DBTP11182 482 aaKnown RBP8.04□□□□□ -1.12
VPS29-208ENST00000550267 IL3RAP26951 378 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 VHLP40337 213 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 PAX5Q02548 391 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 GALEQ14376 348 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 MMDQ15546 238 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 ZSCAN26Q16670 478 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 FAM220AQ7Z4H9 259 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 OR51A4Q8NGJ6 313 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 OR13C3Q8NGS6 347 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 OR2G2Q8NGZ5 317 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 CANT1Q8WVQ1 401 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 ARL11Q969Q4 196 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 FAM110AQ9BQ89 295 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 PRRG3Q9BZD7 231 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 GFOD1Q9NXC2 390 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 ZNF581Q9P0T4 197 aa8.04□□□□□ -1.12
VPS29-208ENST00000550267 IGHV7-81A0A0B4J1V7 117 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 SHISA3A0PJX4 238 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 B2RBV5 119 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 C15orf65H3BRN8 121 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 SOX15O60248 233 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 IGLV1-51P01701 117 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 CNTFRP26992 372 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 EPHA2P29317 976 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 BLVRBP30043 206 aaPredicted RBP8.03□□□□□ -1.12
VPS29-208ENST00000550267 KCNJ3P48549 501 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 DAPP51397 102 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 NANOS3P60323 173 aaKnown RBP8.03□□□□□ -1.12
VPS29-208ENST00000550267 ZNF85Q03923 595 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 IL13RA2Q14627 380 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 KISS1Q15726 138 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 PIGYQ3MUY2 71 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 C12orf73Q69YU5 71 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 FAHD1Q6P587 224 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 ANKRD13BQ86YJ7 626 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 ARHGAP24Q8N264 748 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 C8orf31Q8N9H6 132 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 SUMF2Q8NBJ7 301 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 MINDY2Q8NBR6 621 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 OR52M1Q8NGK5 317 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 OR10K1Q8NGX5 313 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 DNAJC9Q8WXX5 260 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 CCDC124Q96CT7 223 aaKnown RBP8.03□□□□□ -1.12
VPS29-208ENST00000550267 RSRP1Q9BUV0 290 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 WARS2Q9UGM6 360 aaKnown RBP8.03□□□□□ -1.12
VPS29-208ENST00000550267 STUB1Q9UNE7 303 aa8.03□□□□□ -1.12
VPS29-208ENST00000550267 MRPS28Q9Y2Q9 187 aaKnown RBP8.03□□□□□ -1.12
VPS29-208ENST00000550267 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.12
VPS29-208ENST00000550267 A0A1W2PN81 502 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 ZAR1LA6NP61 321 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 C12orf77C9JDV5 145 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 TXNL1O43396 289 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 MITFO75030 526 aaPredicted RBP8.02□□□□□ -1.13
VPS29-208ENST00000550267 IGHV3-11P01762 117 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 HLA-DRB1P01911 266 aa8.02□□□□□ -1.13
VPS29-208ENST00000550267 HSPB1P04792 205 aaKnown RBP8.02□□□□□ -1.13
VPS29-208ENST00000550267 ISG15P05161 165 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms