RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 ST6GALNAC6Q969X2 333 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CREB3L1Q96BA8 519 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
COX6A1-203ENST00000550009 AKR1E2Q96JD6 320 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 S100A13Q99584 98 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 SELENOIQ9C0D9 397 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
COX6A1-203ENST00000550009 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
COX6A1-203ENST00000550009 TSSC4Q9Y5U2 329 aaPredicted RBP12.57□□□□□ -0.4
COX6A1-203ENST00000550009 PEX16Q9Y5Y5 336 aa12.57□□□□□ -0.4
COX6A1-203ENST00000550009 PSMB11A5LHX3 300 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 MGMTP16455 207 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 ZNF816Q0VGE8 651 aaPredicted RBP12.56□□□□□ -0.4
COX6A1-203ENST00000550009 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 Q8N6K4 173 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 WFDC9Q8NEX5 89 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 RTN4IP1Q8WWV3 396 aaPredicted RBP12.56□□□□□ -0.4
COX6A1-203ENST00000550009 TFAP2CQ92754 450 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 Q96M66 194 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 PLSCR3Q9NRY6 295 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 PLCXD1Q9NUJ7 323 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 ETAA1Q9NY74 926 aa12.56□□□□□ -0.4
COX6A1-203ENST00000550009 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 MYL12BO14950 172 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 CRTAPO75718 401 aaPredicted RBP12.55□□□□□ -0.4
COX6A1-203ENST00000550009 HBZP02008 142 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 GZMHP20718 246 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 RAB7AP51149 207 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 F2RL1P55085 397 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 UNQ9370/PRO34162Q6UXP9 181 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 LINC00596Q86U02 117 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 LRRTM1Q86UE6 522 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 Q8N9W7 124 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 OR10A7Q8NGE5 316 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 OR52L2PQ8NGH6 319 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 RITA1Q96K30 269 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 TMED9Q9BVK6 235 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 CKLFQ9UBR5 152 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
COX6A1-203ENST00000550009 LSM2Q9Y333 95 aaKnown RBP12.55□□□□□ -0.4
COX6A1-203ENST00000550009 MCRIP1C9JLW8 97 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 ORC5O43913 435 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 PF4P02776 101 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 CDK1P06493 297 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 SNRPBP14678 240 aaKnown RBP12.54□□□□□ -0.4
COX6A1-203ENST00000550009 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
COX6A1-203ENST00000550009 AQP4P55087 323 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 GABPB1Q06547 395 aaPredicted RBP12.54□□□□□ -0.4
COX6A1-203ENST00000550009 EBI3Q14213 229 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 C8orf86Q6ZUL3 223 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 LINC00311Q8N616 119 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 OR4X2Q8NGF9 303 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 MRPL30Q8TCC3 161 aaKnown RBP12.54□□□□□ -0.4
COX6A1-203ENST00000550009 GFI1Q99684 422 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 SULT4A1Q9BR01 284 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 NICN1Q9BSH3 213 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 NECAP2Q9NVZ3 263 aa12.54□□□□□ -0.4
COX6A1-203ENST00000550009 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
COX6A1-203ENST00000550009 K7EIL1 84 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
COX6A1-203ENST00000550009 MPIG6BO95866 241 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 GAPDHP04406 335 aaKnown RBP12.53□□□□□ -0.4
COX6A1-203ENST00000550009 CNTFRP26992 372 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 MED21Q13503 144 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 ACSM3Q53FZ2 586 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 SLC16A12Q6ZSM3 486 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 GAPTQ8N292 157 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
COX6A1-203ENST00000550009 SERPINE3A8MV23 424 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 H3BUI4 141 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 M0QZK8 103 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 SC5DO75845 299 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 IGHG2P01859 326 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 PPP1CCP36873 323 aaKnown RBP12.52□□□□□ -0.41
COX6A1-203ENST00000550009 TAS2R43P59537 309 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 RPL23AP62750 156 aaKnown RBP12.52□□□□□ -0.41
COX6A1-203ENST00000550009 UNC119Q13432 240 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
COX6A1-203ENST00000550009 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 SLC35E3Q7Z769 313 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 MRPL41Q8IXM3 137 aaKnown RBP12.52□□□□□ -0.41
COX6A1-203ENST00000550009 ODF3L1Q8IXM7 274 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 IZUMO1Q8IYV9 350 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 STPG2Q8N412 459 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 FAAP24Q9BTP7 215 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.41
COX6A1-203ENST00000550009 TAF9BQ9HBM6 251 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
COX6A1-203ENST00000550009 PCDHB16Q9NRJ7 776 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms