RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 LDLRAD3Q86YD5 345 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 C9orf62Q8N4C0 152 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 TCTEX1D1Q8N7M0 179 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 INO80EQ8NBZ0 244 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-215ENST00000547672 EDARADDQ8WWZ3 215 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 SPIN2AQ99865 258 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 SPIN2BQ9BPZ2 258 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM204Q9BSN7 226 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 SHARPINQ9H0F6 387 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 LIME1Q9H400 295 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 SPTA1P02549 2419 aa11.26□□□□□ -0.61
PTCH1-215ENST00000547672 PPIAL4EA0A075B759 164 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 IGKV1-6A0A0C4DH72 117 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ODAMA1E959 279 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 PPIAL4DF5H284 164 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ATG12O94817 140 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 PPIAL4FP0DN26 164 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 RPA2P15927 270 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 EGR1P18146 543 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 PPOXP50336 477 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 P2RX3P56373 397 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM187Q14656 261 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 SMCO1Q147U7 214 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 HFEQ30201 348 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ANKRD55Q3KP44 614 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 STUMQ69YW2 141 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 C11orf87Q6NUJ2 197 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 Q6ZPA2 131 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF767PQ75MW2 155 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF695Q8IW36 515 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 DMRTC2Q8IXT2 367 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-215ENST00000547672 MUC15Q8N387 334 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 ARL11Q969Q4 196 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 C14orf79Q96F83 325 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 SEC22AQ96IW7 307 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 RDH8Q9NYR8 311 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 PPIAL4AQ9Y536 164 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 CACNA1BQ00975 2339 aa11.25□□□□□ -0.61
PTCH1-215ENST00000547672 PRR14LQ5THK1 2151 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 FXYD6-FXYD2A0A087WZ82 144 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TRGV10A0A0A0MS01 117 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 C12orf77C9JDV5 145 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 H0Y980 276 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM178BH3BS89 294 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-215ENST00000547672 OR2F2O95006 317 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 HBZP02008 142 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 GLIPR1P48060 266 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 CEBPDP49716 269 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-215ENST00000547672 MEF2CQ06413 473 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TFF3Q07654 80 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 OR2F1Q13607 317 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 SWI5Q1ZZU3 235 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 PRR18Q8N4B5 295 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 OR11H4Q8NGC9 324 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 PPP1R1CQ8WVI7 109 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 RAB39BQ96DA2 213 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 COQ2Q96H96 371 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM56Q96MV1 263 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM222Q9H0R3 208 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 PLEKHF2Q9H8W4 249 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 FAM212BQ9NTI7 297 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 JPT1Q9UK76 154 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 TMEM56-RWDD3S4R434 201 aa11.24□□□□□ -0.61
PTCH1-215ENST00000547672 CADP27708 2225 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 IGHV1-69-2A0A0G2JMI3 117 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 hADV38S2A0JD32 116 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-215ENST00000547672 CDS2O95674 445 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 CYB5R3P00387 301 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-215ENST00000547672 IFNA7P01567 189 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 SERPINE2P07093 398 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 HOXB5P09067 269 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 OR5AC1P0C628 307 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 F2RP25116 425 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 S100A11P31949 105 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 CD80P33681 288 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 MRPS11P82912 194 aaKnown RBP11.23□□□□□ -0.61
PTCH1-215ENST00000547672 LGALSLQ3ZCW2 172 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-215ENST00000547672 LAMTOR1Q6IAA8 161 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 OR10A7Q8NGE5 316 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 MRGPRDQ8TDS7 321 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 GLYATL2Q8WU03 294 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 CORO2AQ92828 525 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 CYYR1Q96J86 154 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 MFFQ9GZY8 342 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 OR2S2Q9NQN1 319 aa11.23□□□□□ -0.61
PTCH1-215ENST00000547672 LIN7CQ9NUP9 197 aaKnown RBP11.23□□□□□ -0.61
PTCH1-215ENST00000547672 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
PTCH1-215ENST00000547672 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms