RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MDFIC2A0A1B0GVS7 189 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 A6NJ64 397 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 SERPINE3A8MV23 424 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 PAHP00439 452 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 RNASE1P07998 156 aaKnown RBP11.74□□□□□ -0.53
DDX54-203ENST00000546869 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
DDX54-203ENST00000546869 RCC1P18754 421 aaPredicted RBP11.74□□□□□ -0.53
DDX54-203ENST00000546869 VBP1P61758 197 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 NCS1P62166 190 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 UBA52P62987 128 aaKnown RBP11.74□□□□□ -0.53
DDX54-203ENST00000546869 HTD2P86397 168 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 LY6G6FQ5SQ64 297 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 ATG5Q9H1Y0 275 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 TAF9BQ9HBM6 251 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 ZNF286AQ9HBT8 521 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 ATRQ13535 2644 aa11.74□□□□□ -0.53
DDX54-203ENST00000546869 DNAJC9-AS1A6NH13 148 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 J3QR06 171 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 MFNGO00587 321 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 TOR1AO14656 332 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
DDX54-203ENST00000546869 HIST1H1DP16402 221 aaKnown RBP11.73□□□□□ -0.53
DDX54-203ENST00000546869 HTR1DP28221 377 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 DYNLT3P51808 116 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 TMBIM6P55061 237 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 RPL15P61313 204 aaKnown RBP11.73□□□□□ -0.53
DDX54-203ENST00000546869 HMGN3Q15651 99 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 SRSF7Q16629 238 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX54-203ENST00000546869 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 STEAP3Q658P3 488 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 BAIAP2L2Q6UXY1 529 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 LHFPL4Q7Z7J7 247 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 OR5R1Q8NH85 324 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 LGALS14Q8TCE9 139 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 C17orf50Q8WW18 174 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 CYYR1Q96J86 154 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 CMTM3Q96MX0 182 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 NAA50Q9GZZ1 169 aaKnown RBP11.73□□□□□ -0.53
DDX54-203ENST00000546869 ABCG5Q9H222 651 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 C12orf4Q9NQ89 552 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 GFOD1Q9NXC2 390 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 DPM3Q9P2X0 92 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 SCOCQ9UIL1 159 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
DDX54-203ENST00000546869 LEUTXA8MZ59 168 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 OOSP1A8MZH6 123 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 HBZP02008 142 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 NFYBP25208 207 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 CEACAM3P40198 252 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 SERPINB10P48595 397 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 OR5H6Q8NGV6 325 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 RAB2BQ8WUD1 216 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 CMSS1Q9BQ75 279 aaKnown RBP11.72□□□□□ -0.53
DDX54-203ENST00000546869 MMP28Q9H239 520 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 Q9N2K0 584 aa11.72□□□□□ -0.53
DDX54-203ENST00000546869 KIAA2026Q5HYC2 2103 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
DDX54-203ENST00000546869 GSTP1P09211 210 aaKnown RBP11.71□□□□□ -0.53
DDX54-203ENST00000546869 RORCP51449 518 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 KRTAP24-1Q3LI83 254 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 CDNFQ49AH0 187 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 Q6ZPA2 131 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 ACOT12Q8WYK0 555 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 GALMQ96C23 342 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 SLC25A38Q96DW6 304 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 OCSTAMPQ9BR26 566 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 CHMP1AQ9HD42 196 aaPredicted RBP11.71□□□□□ -0.53
DDX54-203ENST00000546869 JPT1Q9UK76 154 aa11.71□□□□□ -0.53
DDX54-203ENST00000546869 AMMECR1Q9Y4X0 333 aaPredicted RBP11.71□□□□□ -0.53
DDX54-203ENST00000546869 YPEL1O60688 119 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 DIRAS3O95661 229 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 CD3GP09693 182 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 GNB3P16520 340 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
DDX54-203ENST00000546869 PITPNAQ00169 270 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 SSX2Q16385 188 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 PNLIPRP3Q17RR3 467 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 ZNF260Q3ZCT1 412 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 UTF1Q5T230 341 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 HACD4Q5VWC8 232 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
DDX54-203ENST00000546869 Q6ZS49 121 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms