RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 CRISP1P54107 249 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 ACTBP60709 375 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 EFNB1P98172 346 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 LSAMPQ13449 338 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 LRRC36Q1X8D7 754 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 C5orf64Q2M2E5 130 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 PIGYQ3MUY2 71 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 SPATS1Q496A3 300 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 CT45A1Q5HYN5 189 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 CT45A3Q8NHU0 189 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 UTP4Q969X6 686 aaKnown RBP7.14□□□□□ -1.27
CHD4-212ENST00000545083 FLYWCH2Q96CP2 140 aaKnown RBP7.14□□□□□ -1.27
CHD4-212ENST00000545083 RHOVQ96L33 236 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 TEX12Q9BXU0 123 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 ZNF556Q9HAH1 456 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 PLEKHA3Q9HB20 300 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 ARL8BQ9NVJ2 186 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 FAM118AQ9NWS6 357 aa7.14□□□□□ -1.27
CHD4-212ENST00000545083 FOXA2Q9Y261 457 aaPredicted RBP7.14□□□□□ -1.27
CHD4-212ENST00000545083 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 PKHD1P08F94 4074 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 TXNL1O43396 289 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 SULT1C4O75897 302 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 FAM107AO95990 144 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 OCM2P0CE71 109 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 OCMP0CE72 109 aaPredicted RBP7.13□□□□□ -1.27
CHD4-212ENST00000545083 TMEM225BP0DP42 221 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 RAP2AP10114 183 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 GZMHP20718 246 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 KCNJ3P48549 501 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 CRIP2P52943 208 aaPredicted RBP7.13□□□□□ -1.27
CHD4-212ENST00000545083 RAB40BQ12829 278 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 PMS2P11Q13670 270 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 PTGES3Q15185 160 aaKnown RBP7.13□□□□□ -1.27
CHD4-212ENST00000545083 TP53I3Q53FA7 332 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 TMEM244Q5VVB8 128 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 NXNL2Q5VZ03 156 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 ELP2Q6IA86 826 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 GTSCR1Q86UQ5 136 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 DHFR2Q86XF0 187 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 TCEANCQ8N8B7 351 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 SUMF2Q8NBJ7 301 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 OR10K1Q8NGX5 313 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 OR2G2Q8NGZ5 317 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 CCDC107Q8WV48 283 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 MS4A10Q96PG2 267 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 ELAC2Q9BQ52 826 aaKnown RBP7.13□□□□□ -1.27
CHD4-212ENST00000545083 DPCDQ9BVM2 203 aaPredicted RBP7.13□□□□□ -1.27
CHD4-212ENST00000545083 A3GALT2U3KPV4 340 aa7.13□□□□□ -1.27
CHD4-212ENST00000545083 SHISA3A0PJX4 238 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 H0Y980 276 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 NBR2O15453 112 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 LANCL1O43813 399 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 DBTP11182 482 aaKnown RBP7.12□□□□□ -1.27
CHD4-212ENST00000545083 ANXA8P13928 327 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 EPHA2P29317 976 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 TPPP2P59282 170 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 NANOS3P60323 173 aaKnown RBP7.12□□□□□ -1.27
CHD4-212ENST00000545083 CX3CL1P78423 397 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 EWSR1Q01844 656 aaKnown RBP eCLIP7.12□□□□□ -1.27
CHD4-212ENST00000545083 ZNF85Q03923 595 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
CHD4-212ENST00000545083 IL13RA2Q14627 380 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 KISS1Q15726 138 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 LIN54Q6MZP7 749 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 ADGRG5Q8IZF4 528 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 OR10H4Q8NGA5 316 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 OR10V1Q8NGI7 309 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 TMEM163Q8TC26 289 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 TMEM106AQ96A25 262 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 IL4I1Q96RQ9 567 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 ZNF251Q9BRH9 671 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 MRPL20Q9BYC9 149 aaKnown RBP7.12□□□□□ -1.27
CHD4-212ENST00000545083 WFDC10AQ9H1F0 79 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 FRRS1LQ9P0K9 344 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 H2AFY2Q9P0M6 372 aaPredicted RBP7.12□□□□□ -1.27
CHD4-212ENST00000545083 TAGLN3Q9UI15 199 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 GNG8Q9UK08 70 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 ADAM30Q9UKF2 790 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 NUBP2Q9Y5Y2 271 aa7.12□□□□□ -1.27
CHD4-212ENST00000545083 TMEM30CPA0ZSE6 113 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 FCN1O00602 326 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 GNGT2O14610 69 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 ORC5O43913 435 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 NDUFA3O95167 84 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 ISG15P05161 165 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 OR2T7P0C7T2 308 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
CHD4-212ENST00000545083 TRIM25Q14258 630 aaKnown RBP7.11□□□□□ -1.27
CHD4-212ENST00000545083 Q3ZCU0 254 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 ZNF691Q5VV52 312 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 LPCAT4Q643R3 524 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 FAHD1Q6P587 224 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 DEFB125Q8N687 156 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 NPBQ8NG41 125 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 OR9G4Q8NGQ1 327 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 OR13C3Q8NGS6 347 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 LRGUKQ96M69 825 aa7.11□□□□□ -1.27
CHD4-212ENST00000545083 FAM103A1Q9BTL3 118 aaKnown RBP7.11□□□□□ -1.27
CHD4-212ENST00000545083 CST11Q9H112 138 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms