RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RDH5Q92781 318 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 GPR146Q96CH1 333 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 P2RX4Q99571 388 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 ARRDC1-AS1Q9H2J1 176 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 MBNL3Q9NUK0 354 aaKnown RBP11.09□□□□□ -0.63
CPSF7-223ENST00000544669 LAMP3Q9UQV4 416 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 TNRC6AQ8NDV7 1962 aaKnown RBP11.09□□□□□ -0.63
CPSF7-223ENST00000544669 OR2C1O95371 312 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 F10P00742 488 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 CA6P23280 308 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 WNT5AP41221 380 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 FHITP49789 147 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 ERVK11-1P61568 191 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 HABP2Q14520 560 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-223ENST00000544669 KRBOX4Q5JUW0 171 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 Q6P435 159 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 P4HA3Q7Z4N8 544 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 TVP23CQ96ET8 276 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 WDYHV1Q96HA8 205 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 MAGT1Q9H0U3 335 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 FOXJ2Q9P0K8 574 aa11.09□□□□□ -0.63
CPSF7-223ENST00000544669 SOX15O60248 233 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 CST7O76096 145 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 IL18BPO95998 194 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 PPP1CCP36873 323 aaKnown RBP11.08□□□□□ -0.64
CPSF7-223ENST00000544669 CATR1Q13166 79 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 SPSB3Q6PJ21 355 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 MDP1Q86V88 176 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 PSENENQ9NZ42 101 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 DNAH14Q0VDD8 3507 aa11.08□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF891A8MT65 544 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 IQCF6A8MYZ5 107 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 HSPB6O14558 160 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 C1QL1O75973 258 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SRP19P09132 144 aaKnown RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PGA5P0DJD9 388 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 OR13C7P0DN81 318 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PAX9P55771 341 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 UBE2KP61086 200 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PPP1CBP62140 327 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 IGFBP7Q16270 282 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 OR2T2Q6IF00 324 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM217Q8N7C4 229 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 MBD3L1Q8WWY6 194 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM9BQ9NQ34 198 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PLA2G3Q9NZ20 509 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PUS1Q9Y606 427 aaKnown RBP eCLIP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 TMEM30CPA0ZSE6 113 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 H3BQ15 152 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 NXPH2O95156 264 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 MBP02144 154 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PSG2P11465 335 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 HOXC12P31275 282 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SNRPEP62304 92 aaKnown RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 RBMS3Q6XE24 437 aaKnown RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SCCPDHQ8NBX0 429 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 C1orf162Q8NEQ5 155 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 IL1F10Q8WWZ1 152 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 ESRP2Q9H6T0 727 aaKnown RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 ZDHHC11Q9H8X9 412 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 CISD1Q9NZ45 108 aaKnown RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 PRSS50Q9UI38 385 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SDK1Q7Z5N4 2213 aa11.07□□□□□ -0.64
CPSF7-223ENST00000544669 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF503-AS2A6NEH8 195 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 KIAA1324LA8MWY0 1029 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-223ENST00000544669 SLC33A1O00400 549 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-223ENST00000544669 OR2H2O95918 312 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 CD59P13987 128 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 FOXG1P55316 489 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-223ENST00000544669 ARG2P78540 354 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF154Q13106 437 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 ZNF766Q5HY98 468 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 SLC35E4Q6ICL7 350 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 THNSL2Q86YJ6 484 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 BATF2Q8N1L9 274 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 CLDND2Q8NHS1 167 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 C2CD4CQ8TF44 421 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 NINJ1Q92982 152 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 TCEAL3Q969E4 200 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 GALMQ96C23 342 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 CIB3Q96Q77 187 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-223ENST00000544669 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 HES7Q9BYE0 225 aa11.06□□□□□ -0.64
CPSF7-223ENST00000544669 MYO7BQ6PIF6 2116 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
CPSF7-223ENST00000544669 OOEPA6NGQ2 149 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms