RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 WDYHV1Q96HA8 205 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 CHRNA10Q9GZZ6 450 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 TIMM9Q9Y5J7 89 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 IGHV5-51A0A0C4DH38 117 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 IGKV1-12A0A0C4DH73 117 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 TNFSF12O43508 249 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 YPEL1O60688 119 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 LILRA1O75019 489 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 IGKV1D-12P01611 117 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 SELEP16581 610 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 S100GP29377 79 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 WNT5AP41221 380 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 SRSF7Q16629 238 aaKnown RBP eCLIP8.34□□□□□ -1.07
TCF4-208ENST00000543082 PRSS8Q16651 343 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 RSPO1Q2MKA7 263 aaPredicted RBP8.34□□□□□ -1.07
TCF4-208ENST00000543082 SAPCD1Q5SSQ6 148 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 C10orf128Q5T292 105 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 FOXL2NBQ6ZUU3 175 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 NUFIP2Q7Z417 695 aaKnown RBP8.34□□□□□ -1.07
TCF4-208ENST00000543082 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 YPEL2Q96QA6 119 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 RASL10BQ96S79 203 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 WDR61Q9GZS3 305 aaKnown RBP8.34□□□□□ -1.07
TCF4-208ENST00000543082 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
TCF4-208ENST00000543082 SPAG17Q6Q759 2223 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 LOC102725191A0A1B0GVB3 256 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 LILRA5A6NI73 299 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 SLC22A20A6NK97 555 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 ZNF814B7Z6K7 855 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 TCF21O43680 179 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 SNAI3Q3KNW1 292 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 TMEM144Q7Z5S9 345 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 PRSS58Q8IYP2 241 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 OR4F5Q8NH21 305 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 POC1BQ8TC44 478 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 SEC16AO15027 2179 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 SPTY2D1-AS1A0A0U1RR47 76 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 CTXND1A0A1B0GTU2 59 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 CCDC85CA6NKD9 419 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 AQP7P3A6NL99 342 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 KIAA1324LA8MWY0 1029 aaPredicted RBP8.33□□□□□ -1.08
TCF4-208ENST00000543082 TUSC2O75896 110 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 PDGFBP01127 241 aaPredicted RBP8.33□□□□□ -1.08
TCF4-208ENST00000543082 DRD1P21728 446 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 EPHA8P29322 1005 aaPredicted RBP8.33□□□□□ -1.08
TCF4-208ENST00000543082 RAB7AP51149 207 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 GFERP55789 205 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 CLDN17P56750 224 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 BATFQ16520 125 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 TPTE2P1Q5T6R2 138 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 FAM78BQ5VT40 261 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 C11orf42Q8N5U0 333 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 NABP1Q96AH0 204 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 NEIL1Q96FI4 390 aaPredicted RBP8.33□□□□□ -1.08
TCF4-208ENST00000543082 MRGPRX1Q96LB2 322 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 CRISPLD2Q9H0B8 497 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 GAL3ST2Q9H3Q3 398 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 DNAJC4Q9NNZ3 241 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 PLEK2Q9NYT0 353 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 KLRF1Q9NZS2 232 aa8.33□□□□□ -1.08
TCF4-208ENST00000543082 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 A0A0G2JRQ6 117 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 A0A0U1RQK1 487 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A10PA6NDY2 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A18PA6NE21 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A16PA6NEW6 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A20PA6NIJ5 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A8PA6NJQ4 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A7PA6NKC0 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A22PA8MWA6 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A12PA8MX19 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A5PA8MXJ8 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A23PA8MXZ1 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 SYNGR2O43760 224 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 OR7C1O76099 320 aaPredicted RBP8.32□□□□□ -1.08
TCF4-208ENST00000543082 NRASP01111 189 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A15PP0C7V4 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A13PP0C7W8 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A14PP0C7W9 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 FAM90A24PP0C7X0 464 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 GCH1P30793 250 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 TFF2Q03403 129 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 TMEM31Q5JXX7 168 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 OR2AE1Q8NHA4 323 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 ZNF296Q8WUU4 475 aaPredicted RBP8.32□□□□□ -1.08
TCF4-208ENST00000543082 TAF15Q92804 592 aaKnown RBP eCLIP8.32□□□□□ -1.08
TCF4-208ENST00000543082 EXTL1Q92935 676 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 WNT5BQ9H1J7 359 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 OR51B6Q9H340 312 aa8.32□□□□□ -1.08
TCF4-208ENST00000543082 RIMS4Q9H426 269 aaPredicted RBP8.32□□□□□ -1.08
TCF4-208ENST00000543082 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms