RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZNF488Q96MN9 340 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 CTDSP1Q9GZU7 261 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 LYRM2Q9NU23 88 aaPredicted RBP7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 TUBD1Q9UJT1 453 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 PSG11Q9UQ72 335 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 PLXNA2O75051 1894 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 PMS2P1A4D2B8 440 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 DEFB108AA8MXU0 73 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 M0R1X1 148 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 TRGC2P03986 189 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 KLK2P20151 261 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 PAX6P26367 422 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 LTBRP36941 435 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 CDC34P49427 236 aaPredicted RBP7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 THBS3P49746 956 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 ZNF441Q8N8Z8 693 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 DAZAP1Q96EP5 407 aaKnown RBP7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 TP53RKQ96S44 253 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 OR51M1Q9H341 326 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 TRAPPC1Q9Y5R8 145 aa7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 CHCHD2Q9Y6H1 151 aaPredicted RBP7.09□□□□□ -1.27
PRKAB1-207ENST00000542698 A0A0A6YYD4 124 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A10PA6NDY2 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A18PA6NE21 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A16PA6NEW6 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A8PA6NJQ4 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A7PA6NKC0 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 OR5H1A6NKK0 313 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A22PA8MWA6 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A12PA8MX19 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A5PA8MXJ8 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A23PA8MXZ1 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FCGR3BO75015 233 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 TNFSF15O95150 251 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 CRYAAP02489 173 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A15PP0C7V4 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A13PP0C7W8 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A14PP0C7W9 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FAM90A24PP0C7X0 464 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 BCL2P10415 239 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 FGF5P12034 268 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF880Q6PDB4 577 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 NUFIP2Q7Z417 695 aaKnown RBP7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 SLC35E3Q7Z769 313 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 LILRB1Q8NHL6 650 aaPredicted RBP7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 SARAFQ96BY9 339 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 PACRGQ96M98 296 aaPredicted RBP7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF665Q9H7R5 613 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 DOK5Q9P104 306 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 PITPNC1Q9UKF7 332 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 CLDN16Q9Y5I7 305 aa7.09□□□□□ -1.28
PRKAB1-207ENST00000542698 H0Y980 276 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 OR7C2O60412 319 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PGLYRP1O75594 196 aaPredicted RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PTBP3O95758 552 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PMELP40967 661 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PCOLCEQ15113 449 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 Q3ZCU0 254 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 SLC25A53Q5H9E4 307 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF383Q8NA42 475 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 OR1K1Q8NGR3 316 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MRGPRDQ8TDS7 321 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 CT55Q8WUE5 264 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MESP1Q9BRJ9 268 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 GINS3Q9BRX5 216 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 Q9N2K0 584 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PLXNB3Q9ULL4 1909 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 TANC1Q9C0D5 1861 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 IGLV3-12A0A075B6K2 115 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 A0A087X0M5 115 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 A0A1B0GX30 115 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 EFNA2O43921 213 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 LY86O95711 162 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 CLPSP04118 112 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MAGEA5P43359 124 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 SUPT4H1P63272 117 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 IQCJQ1A5X6 159 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 SPINK9Q5DT21 86 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 SELENOHQ8IZQ5 122 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 TMEM54Q969K7 222 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF837Q96EG3 531 aaPredicted RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MARS2Q96GW9 593 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 BOD1Q96IK1 185 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 GPR87Q9BY21 358 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 ZNF331Q9NQX6 463 aaPredicted RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 METTL1Q9UBP6 276 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 SHANK1Q9Y566 2161 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 LYZL6O75951 148 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MEOX1P50221 254 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 PMS2P11Q13670 270 aa7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 CISD2Q8N5K1 135 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 RBMXL3Q8N7X1 1067 aaKnown RBP7.08□□□□□ -1.28
PRKAB1-207ENST00000542698 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms