RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 TXNL1O43396 289 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 KIR2DL2P43627 348 aaPredicted RBP14.6□□□□□ -0.07
SPIDR-227ENST00000541342 HERV-K104P61576 105 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 PLP2Q04941 152 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 MALLQ13021 153 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 PLCXD3Q63HM9 321 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 C1QL4Q86Z23 238 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 SNIP1Q8TAD8 396 aaKnown RBP14.6□□□□□ -0.07
SPIDR-227ENST00000541342 SLAMF9Q96A28 289 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 MUCL1Q96DR8 90 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM56Q96MV1 263 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 HS3ST6Q96QI5 342 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM56-RWDD3S4R434 201 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 CACNA1GO43497 2377 aa14.6□□□□□ -0.07
SPIDR-227ENST00000541342 FUT6P51993 359 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 RND3P61587 244 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 ACSF3Q4G176 576 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 FAM209BQ5JX69 171 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 NCMAPQ5T1S8 102 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 VWA1Q6PCB0 445 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 TBC1D26Q86UD7 250 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 RBMXL3Q8N7X1 1067 aaKnown RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 CCDC71LQ8N9Z2 235 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 SUMF2Q8NBJ7 301 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 OR51M1Q9H341 326 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 LYRM2Q9NU23 88 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 DKK4Q9UBT3 224 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 GTF3C1Q12789 2109 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 TRAV20A0A0B4J274 112 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 A0A1W2PR80 420 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 RBFOX3A6NFN3 312 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 IFITM10A6NMD0 228 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 SSSCA1O60232 199 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 OR7C1O76099 320 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 OR2C1O95371 312 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 IGHV2-70P01814 119 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 FUT3P21217 361 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 FOXF2Q12947 444 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF818PQ6ZRF7 136 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 CNEP1R1Q8N9A8 125 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 PLPPR1Q8TBJ4 325 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 FGF23Q9GZV9 251 aaPredicted RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF442Q9H7R0 627 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 SVILO95425 2214 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF727A8MUV8 499 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 HSD17B6O14756 317 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 LYZL6O75951 148 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 SELENOHQ8IZQ5 122 aaKnown RBP14.59□□□□□ -0.07
SPIDR-227ENST00000541342 TMEM252Q8N6L7 170 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 ZNF611Q8N823 705 aa14.59□□□□□ -0.07
SPIDR-227ENST00000541342 FBP1P09467 338 aa14.58□□□□□ -0.07
SPIDR-227ENST00000541342 EIF2S3P41091 472 aaKnown RBP14.58□□□□□ -0.07
SPIDR-227ENST00000541342 NKX2-1P43699 371 aaPredicted RBP14.58□□□□□ -0.07
SPIDR-227ENST00000541342 HERPUD1Q15011 391 aa14.58□□□□□ -0.07
SPIDR-227ENST00000541342 LURAP1LQ8IV03 231 aa14.58□□□□□ -0.07
SPIDR-227ENST00000541342 TCEAL7Q9BRU2 100 aa14.58□□□□□ -0.07
SPIDR-227ENST00000541342 IGKV1D-13A0A0B4J2D9 117 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 CELA3BP08861 270 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 IGKV1-13P0DP09 117 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 APLNRP35414 380 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 TSC22D1Q15714 1073 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 SLC25A26Q70HW3 274 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 DPPA2Q7Z7J5 298 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 OR5C1Q8NGR4 320 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 H3BQ15 152 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 ADAM20O43506 726 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 RUNX1Q01196 453 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF266Q14584 549 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 NMSQ5H8A3 153 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 Q6ZT83 130 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 MRPL21Q7Z2W9 205 aaKnown RBP14.58□□□□□ -0.08
SPIDR-227ENST00000541342 NANOS1Q8WY41 292 aaKnown RBP14.58□□□□□ -0.08
SPIDR-227ENST00000541342 RAB39BQ96DA2 213 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 OR51B6Q9H340 312 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 SMDT1Q9H4I9 107 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 SLC7A11Q9UPY5 501 aa14.58□□□□□ -0.08
SPIDR-227ENST00000541342 H0YL77 283 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 ATXN7O15265 892 aaPredicted RBP14.57□□□□□ -0.08
SPIDR-227ENST00000541342 CST7O76096 145 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 SCNM1Q9BWG6 230 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 PAPOLGQ9BWT3 736 aaKnown RBP14.57□□□□□ -0.08
SPIDR-227ENST00000541342 TINAGQ9UJW2 476 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 MMP24Q9Y5R2 645 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 SRP19P09132 144 aaKnown RBP14.57□□□□□ -0.08
SPIDR-227ENST00000541342 SCTP09683 121 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 ZNF343Q6P1L6 599 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 GAPTQ8N292 157 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 PLEKHF2Q9H8W4 249 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 ZMAT5Q9UDW3 170 aaKnown RBP14.57□□□□□ -0.08
SPIDR-227ENST00000541342 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 APC2O95996 2303 aa14.57□□□□□ -0.08
SPIDR-227ENST00000541342 DYNLT3P51808 116 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 PRDX4Q13162 271 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 ICAM4Q14773 271 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 GABRA6Q16445 453 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 SEM1Q6ZVN7 128 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 Q8NFD4 153 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 TECTBQ96PL2 329 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 IL36RNQ9UBH0 155 aa14.56□□□□□ -0.08
SPIDR-227ENST00000541342 AHRRA9YTQ3 701 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms