RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 IGLV3-9A0A075B6K5 115 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 TEX13DA0A0J9YY54 714 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 A0A1W2PR80 420 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 TMEM30CPA0ZSE6 113 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 C9orf170A2RU37 121 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 A6NLC8 198 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 LRRC30A6NM36 301 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 HMSDA8MTL9 139 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 FABP7O15540 132 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 SFT2D2O95562 160 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 NAPSAO96009 420 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 GRPP07492 148 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 IRF2P14316 349 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 TNFRSF1AP19438 455 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 USF1P22415 310 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 ANOS1P23352 680 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 VAMP1P23763 118 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 ZBTB25P24278 435 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 LMO1P25800 156 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 NUP62P37198 522 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 PAX5Q02548 391 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 SRSF4Q08170 494 aaKnown RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 PAN3Q58A45 887 aaKnown RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 BEX5Q5H9J7 111 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 C6orf183Q5T699 404 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 SIGIRRQ6IA17 410 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 FAAP20Q6NZ36 180 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 GSG1LQ6UXU4 331 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 MUC20Q8N307 709 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 SUMF2Q8NBJ7 301 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 OR11H7Q8NGC8 314 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 MRPL24Q96A35 216 aaKnown RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 KIRREL1Q96J84 757 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 DMRTB1Q96MA1 342 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 SEC22CQ9BRL7 303 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 ZNF2Q9BSG1 426 aaPredicted RBP7.01□□□□□ -1.29
CHD4-208ENST00000540960 PDCD10Q9BUL8 212 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 SUCNR1Q9BXA5 334 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 C1QTNF6Q9BXI9 259 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 NCOR1P1Q9H4R4 102 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 HES4Q9HCC6 221 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 Q9N2K0 584 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 C1orf123Q9NWV4 160 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 TAAR3PQ9P1P4 343 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
CHD4-208ENST00000540960 OR2AT4A6NND4 320 aa7□□□□□ -1.29
CHD4-208ENST00000540960 NPIPB11E5RHQ5 1161 aa7□□□□□ -1.29
CHD4-208ENST00000540960 RGS13O14921 159 aa7□□□□□ -1.29
CHD4-208ENST00000540960 SYNGR1O43759 233 aa7□□□□□ -1.29
CHD4-208ENST00000540960 HPXP02790 462 aa7□□□□□ -1.29
CHD4-208ENST00000540960 ADH4P08319 380 aa7□□□□□ -1.29
CHD4-208ENST00000540960 VSIG10L2P0DP72 767 aa7□□□□□ -1.29
CHD4-208ENST00000540960 SLC25A16P16260 332 aa7□□□□□ -1.29
CHD4-208ENST00000540960 AKR1C4P17516 323 aa7□□□□□ -1.29
CHD4-208ENST00000540960 GLRA1P23415 457 aa7□□□□□ -1.29
CHD4-208ENST00000540960 GATA4P43694 442 aa7□□□□□ -1.29
CHD4-208ENST00000540960 NPBWR2P48146 333 aa7□□□□□ -1.29
CHD4-208ENST00000540960 NPY4RP50391 375 aa7□□□□□ -1.29
CHD4-208ENST00000540960 ZNF154Q13106 437 aa7□□□□□ -1.29
CHD4-208ENST00000540960 TSC22D1Q15714 1073 aa7□□□□□ -1.29
CHD4-208ENST00000540960 TMEM30BQ3MIR4 351 aa7□□□□□ -1.29
CHD4-208ENST00000540960 SLC35E4Q6ICL7 350 aa7□□□□□ -1.29
CHD4-208ENST00000540960 SLC22A25Q6T423 547 aa7□□□□□ -1.29
CHD4-208ENST00000540960 CLEC2AQ6UVW9 174 aa7□□□□□ -1.29
CHD4-208ENST00000540960 ZNF767PQ75MW2 155 aa7□□□□□ -1.29
CHD4-208ENST00000540960 RNF144BQ7Z419 303 aa7□□□□□ -1.29
CHD4-208ENST00000540960 C1orf87Q8N0U7 546 aa7□□□□□ -1.29
CHD4-208ENST00000540960 ASCC1Q8N9N2 400 aaKnown RBP7□□□□□ -1.29
CHD4-208ENST00000540960 UXS1Q8NBZ7 420 aa7□□□□□ -1.29
CHD4-208ENST00000540960 OR5D13Q8NGL4 314 aa7□□□□□ -1.29
CHD4-208ENST00000540960 OR5M8Q8NGP6 311 aa7□□□□□ -1.29
CHD4-208ENST00000540960 OR10J5Q8NHC4 309 aa7□□□□□ -1.29
CHD4-208ENST00000540960 MARCH1Q8TCQ1 289 aa7□□□□□ -1.29
CHD4-208ENST00000540960 MOB3AQ96BX8 217 aa7□□□□□ -1.29
CHD4-208ENST00000540960 FYTTD1Q96QD9 318 aaKnown RBP7□□□□□ -1.29
CHD4-208ENST00000540960 MS4A5Q9H3V2 200 aa7□□□□□ -1.29
CHD4-208ENST00000540960 BEX1Q9HBH7 125 aa7□□□□□ -1.29
CHD4-208ENST00000540960 BARX1Q9HBU1 254 aaPredicted RBP7□□□□□ -1.29
CHD4-208ENST00000540960 IL19Q9UHD0 177 aa7□□□□□ -1.29
CHD4-208ENST00000540960 DUSP13Q9UII6 198 aa7□□□□□ -1.29
CHD4-208ENST00000540960 VSIG4Q9Y279 399 aa7□□□□□ -1.29
CHD4-208ENST00000540960 A0A0D9SG52 128 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 A0A1B0GW55 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUXBA0A1W2PPF3 345 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 hCG_1807616A0A1W2PRN6 198 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 TRIM77I1YAP6 450 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 GOSR2O14653 212 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 CDIPTO14735 213 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ATG12O94817 140 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 HAND1O96004 215 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 RLN2P04090 185 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L2P0CJ85 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L3P0CJ86 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L4P0CJ87 422 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L5P0CJ88 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L6P0CJ89 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4L7P0CJ90 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 GZMHP20718 246 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms