RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 KIF25Q9UIL4 384 aa14.4□□□□□ -0.1
LTBR-207ENST00000539925 UBE2J1Q9Y385 318 aaPredicted RBP14.4□□□□□ -0.1
LTBR-207ENST00000539925 TMEM56-RWDD3S4R434 201 aa14.4□□□□□ -0.1
LTBR-207ENST00000539925 PIEZO2Q9H5I5 2752 aa14.4□□□□□ -0.1
LTBR-207ENST00000539925 DCHS1Q96JQ0 3298 aa14.4□□□□□ -0.1
LTBR-207ENST00000539925 H0Y980 276 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 ZNF737O75373 536 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 ZNF205O95201 554 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 MUC1P15941 1255 aaPredicted RBP14.39□□□□□ -0.11
LTBR-207ENST00000539925 LRRC37A5PQ49AS3 106 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 GGNBP1Q5YKI7 109 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 TBC1D26Q86UD7 250 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 C1orf87Q8N0U7 546 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 NINJ1Q92982 152 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 GCM1Q9NP62 436 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 ERRFI1Q9UJM3 462 aaPredicted RBP14.39□□□□□ -0.11
LTBR-207ENST00000539925 KANTRA0A1W2PQU2 76 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 RNF212BA8MTL3 300 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 SPINT2O43291 252 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 CDS2O95674 445 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 CEBPDP49716 269 aaPredicted RBP14.39□□□□□ -0.11
LTBR-207ENST00000539925 BEX5Q5H9J7 111 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 ZNF818PQ6ZRF7 136 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 CD177Q8N6Q3 437 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 COQ2Q96H96 371 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 FAM234AQ9H0X4 552 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 MS4A5Q9H3V2 200 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 MBD2Q9UBB5 411 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 PPP1R3CQ9UQK1 317 aa14.39□□□□□ -0.11
LTBR-207ENST00000539925 RBM7Q9Y580 266 aaKnown RBP14.39□□□□□ -0.11
LTBR-207ENST00000539925 IGKV1D-17A0A075B6S4 117 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 IGKV1D-13A0A0B4J2D9 117 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 IGKV1-13P0DP09 117 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 EGR1P18146 543 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 S100A1P23297 94 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 UCP1P25874 307 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 RAB14P61106 215 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 HTD2P86397 168 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 AESQ08117 197 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 EFNB3Q15768 340 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 ZNF695Q8IW36 515 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 SDSLQ96GA7 329 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 SHARPINQ9H0F6 387 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 KCNJ16Q9NPI9 418 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 OR6C3Q9NZP0 311 aa14.38□□□□□ -0.11
LTBR-207ENST00000539925 DMXL2Q8TDJ6 3036 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 C12orf77C9JDV5 145 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 K7N7A8 449 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 PGLYRP1O75594 196 aaPredicted RBP14.37□□□□□ -0.11
LTBR-207ENST00000539925 F2RP25116 425 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 APOBEC3AP31941 199 aaPredicted RBP14.37□□□□□ -0.11
LTBR-207ENST00000539925 CEACAM6P40199 344 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 UBA52P62987 128 aaKnown RBP14.37□□□□□ -0.11
LTBR-207ENST00000539925 CR1LQ2VPA4 569 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 ANGPTL6Q8NI99 470 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 CA5BP1Q8WTZ4 195 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 ABHD14BQ96IU4 210 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 CCL28Q9NRJ3 127 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 GSKIPQ9P0R6 139 aa14.37□□□□□ -0.11
LTBR-207ENST00000539925 FAM90A27PA6NNH2 459 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 SHISA9B4DS77 424 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 HSD17B6O14756 317 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 HTR2BP41595 481 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 TLE1Q04724 770 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 TMEM30BQ3MIR4 351 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 SP6Q3SY56 376 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 TEX36Q5VZQ5 186 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 ADAM5Q6NVV9 412 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 DCUN1D4Q92564 292 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 PLPPR2Q96GM1 343 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 FAM210AQ96ND0 272 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 TP53RKQ96S44 253 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 LIN7CQ9NUP9 197 aaKnown RBP14.36□□□□□ -0.11
LTBR-207ENST00000539925 PRR13Q9NZ81 148 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 OR1A1Q9P1Q5 309 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 ODAMA1E959 279 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 B9A039 149 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 C3orf80F5H4A9 247 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 BCL2L11O43521 198 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 HBZP02008 142 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 AP2S1P53680 142 aaPredicted RBP14.36□□□□□ -0.11
LTBR-207ENST00000539925 PRR18Q8N4B5 295 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 BOLLQ8N9W6 283 aaKnown RBP14.36□□□□□ -0.11
LTBR-207ENST00000539925 RBPMSQ93062 196 aaKnown RBP14.36□□□□□ -0.11
LTBR-207ENST00000539925 CNTNAP3BQ96NU0 1288 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 RNF126Q9BV68 326 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 CNTNAP3Q9BZ76 1288 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 ZNF665Q9H7R5 613 aa14.36□□□□□ -0.11
LTBR-207ENST00000539925 TRAV38-1A0A0B4J264 116 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 RNF222A6NCQ9 220 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 VDAC1P21796 283 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 P2RX3P56373 397 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 ADORA2A-AS1P86434 159 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 RAB32Q13637 225 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 EXOSC2Q13868 293 aaKnown RBP14.35□□□□□ -0.11
LTBR-207ENST00000539925 TMEM268Q5VZI3 342 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 STUMQ69YW2 141 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 TCTEX1D1Q8N7M0 179 aa14.35□□□□□ -0.11
LTBR-207ENST00000539925 EDARADDQ8WWZ3 215 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms