RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 SPACA1Q9HBV2 294 aa10.12□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 GNG12Q9UBI6 72 aa10.12□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 LINC00527Q9UJ94 153 aa10.12□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 NCBP2LA6PVI3 153 aaKnown RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 C12orf77C9JDV5 145 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SLC31A2O15432 143 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SPINT2O43291 252 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 CDK1P06493 297 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 IGLL1P15814 213 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 IL3RAP26951 378 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 LOXL3P58215 753 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 ZNF816Q0VGE8 651 aaPredicted RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 GPR50Q13585 617 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 KPRPQ5T749 579 aaPredicted RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 FAM27D1Q5T7N8 215 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 NKAIN3Q8N8D7 197 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 OR52M1Q8NGK5 317 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 OR1L1Q8NH94 360 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 TFAP2CQ92754 450 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 PHF21AQ96BD5 680 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RBMXL1Q96E39 390 aaKnown RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 MRPS24Q96EL2 167 aaKnown RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 TMED9Q9BVK6 235 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 MND1Q9BWT6 205 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 FKBP14Q9NWM8 211 aa10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RCC2Q9P258 522 aaKnown RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SERPINE3A8MV23 424 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 MPIG6BO95866 241 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 HBZP02008 142 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 CD1AP06126 327 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RCC1P18754 421 aaPredicted RBP10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 ACSM3Q53FZ2 586 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RBM48Q5RL73 367 aaKnown RBP10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 C6orf183Q5T699 404 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SLC35E3Q7Z769 313 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 CDH26Q8IXH8 852 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 THRSPQ92748 146 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 EAF1Q96JC9 268 aaPredicted RBP10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 Q96M66 194 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 DCLRE1BQ9H816 532 aa10.1□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 FGF16O43320 207 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 FUT3P21217 361 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 AQP4P55087 323 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 MED22Q15528 200 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 C6orf141Q5SZD1 244 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SIGIRRQ6IA17 410 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 OR10K2Q6IF99 312 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 Q6ZPA2 131 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 C5orf24Q7Z6I8 188 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 LYPD6Q86Y78 171 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 LINC00311Q8N616 119 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 MRAPQ8TCY5 172 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RTN4IP1Q8WWV3 396 aaPredicted RBP10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 UQCC2Q9BRT2 126 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 CST11Q9H112 138 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 KCNK15Q9H427 330 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 TAF9BQ9HBM6 251 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 NECAP2Q9NVZ3 263 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 SCN3BQ9NY72 215 aa10.09□□□□□ -0.79
TSPAN9-IT1-201ENST00000539784 FAM90A10PA6NDY2 464 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 FAM90A7PA6NKC0 464 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 NUDT19A8MXV4 375 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 FAM90A23PA8MXZ1 464 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 ZNF736B4DX44 427 aaPredicted RBP10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 H0YHG0 523 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 PDCD6O75340 191 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 GP2P55259 537 aaKnown RBP10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 SLC35A2P78381 396 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 GNMTQ14749 295 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 SPHARQ15513 63 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 CT45A1Q5HYN5 189 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 FOXB2Q5VYV0 432 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 GLT8D1Q68CQ7 371 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 TRAT1Q6PIZ9 186 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 SLC25A48Q6ZT89 311 aaKnown RBP10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 REC114Q7Z4M0 266 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 CEACAM19Q7Z692 300 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 LRRTM1Q86UE6 522 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 TGIF2LXQ8IUE1 241 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 FOXRED2Q8IWF2 684 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 IZUMO1Q8IYV9 350 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 MS4A15Q8N5U1 240 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 C8orf31Q8N9H6 132 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 ZNF439Q8NDP4 499 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 OR52L2PQ8NGH6 319 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 OR2T10Q8NGZ9 312 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 CT45A3Q8NHU0 189 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 OR2S2Q9NQN1 319 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 AURKAIP1Q9NWT8 199 aaPredicted RBP10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 KCNIP1Q9NZI2 227 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 TGP01266 2768 aa10.08□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 SC5DO75845 299 aa10.07□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 MOSP00540 346 aa10.07□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 IGHG2P01859 326 aa10.07□□□□□ -0.8
TSPAN9-IT1-201ENST00000539784 HSMCR30P0CW71 290 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms