RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OR6C3Q9NZP0 311 aa15.95■□□□□ 0.14
SFSWAP-207ENST00000538548 SCGB1D1O95968 90 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 GAGE1Q13065 139 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 MRPL52Q86TS9 123 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 LMX1AQ8TE12 382 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 POLR3KQ9Y2Y1 108 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 IGKV1D-13A0A0B4J2D9 117 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 LRRC3CA6NJW4 275 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 TMEM250H0YL14 139 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 CNOT4O95628 575 aaKnown RBP15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 IGKV1-13P0DP09 117 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 SLC25A6P12236 298 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 ELLP55199 621 aaPredicted RBP15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 ZNF525Q8N782 197 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 OR2M3Q8NG83 312 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 OR2T10Q8NGZ9 312 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 ANAPC16Q96DE5 110 aa15.94■□□□□ 0.14
SFSWAP-207ENST00000538548 KIAA1324LA8MWY0 1029 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 TNFSF12O43508 249 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 FUT6P51993 359 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 SRSF7Q16629 238 aaKnown RBP eCLIP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 THOC3Q96J01 351 aaKnown RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 CHD3Q12873 2000 aaKnown RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 TUSC2O75896 110 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 DRD1P21728 446 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 FKBP2P26885 142 aaKnown RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 CNN1P51911 297 aaKnown RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 PRSS12P56730 875 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 DAZAP2Q15038 168 aaPredicted RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 LRRC75BQ2VPJ9 315 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 Q6ZS52 159 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 OR10G3Q8NGC4 313 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 RPUSD4Q96CM3 377 aaKnown RBP15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 CCL28Q9NRJ3 127 aa15.93■□□□□ 0.14
SFSWAP-207ENST00000538548 PIGBOS1A0A0B4J2F0 54 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 A0A0G2JRQ6 117 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 TRBV11-1A0A0K0K1C0 115 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 RPLP1P05386 114 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 PRDX4Q13162 271 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 C17orf82Q86X59 251 aaPredicted RBP15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 EXTL1Q92935 676 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 LHX4Q969G2 390 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 PLK3Q9H4B4 646 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 CD207Q9UJ71 328 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 OR10J1P30954 320 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 SRP14P37108 136 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 RTP5Q14D33 572 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 ANKRD37Q7Z713 158 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 ZNF573Q86YE8 665 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 GPR146Q96CH1 333 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 ZNF385AQ96PM9 386 aaKnown RBP15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 NAGKQ9UJ70 344 aa15.92■□□□□ 0.14
SFSWAP-207ENST00000538548 A0A1W2PPC4 97 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 OR3A1P47881 315 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 HBG1P69891 147 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 HBG2P69892 147 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 CLEC12BQ2HXU8 276 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 FAM27BQ5VT28 67 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 REPIN1Q9BWE0 567 aaKnown RBP15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 PGLYRP1O75594 196 aaPredicted RBP15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 LCATP04180 440 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 SCTP09683 121 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 PARLQ9H300 379 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 SLC39A9Q9NUM3 307 aa15.91■□□□□ 0.14
SFSWAP-207ENST00000538548 SYNGR3O43761 229 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 F2RP25116 425 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 RPL29P47914 159 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 ARL16Q0P5N6 197 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 FAM180AQ6UWF9 173 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 MRPL30Q8TCC3 161 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 PARD6GQ9BYG4 376 aaPredicted RBP15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 IL17BQ9UHF5 180 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 WDFY3Q8IZQ1 3526 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 NAPSAO96009 420 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 PSMB3P49720 205 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 LCN2P80188 198 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 FAM69BQ5VUD6 431 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 RHBDD2Q6NTF9 364 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 ZNF774Q6NX45 483 aa15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 WDR61Q9GZS3 305 aaKnown RBP15.9■□□□□ 0.14
SFSWAP-207ENST00000538548 SYNGR2O43760 224 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 LINC00614P0C842 121 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF92Q03936 586 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 PRSS8Q16651 343 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 KCNIP4Q6PIL6 250 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 ULBP2Q9BZM5 246 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 ZNF391Q9UJN7 358 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 CNTRLQ7Z7A1 2325 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A10PA6NDY2 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A18PA6NE21 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A16PA6NEW6 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A20PA6NIJ5 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A8PA6NJQ4 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A7PA6NKC0 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A22PA8MWA6 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A12PA8MX19 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A5PA8MXJ8 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 FAM90A23PA8MXZ1 464 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 NPIPA2E9PIF3 369 aa15.89■□□□□ 0.13
SFSWAP-207ENST00000538548 NPIPA3F8WFD2 350 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms