RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 TMEM250H0YL14 139 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 CHST1O43916 411 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 RPL15P61313 204 aaKnown RBP13.41□□□□□ -0.26
CHFR-213ENST00000536843 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 AARDQ4LEZ3 155 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 TPTE2P1Q5T6R2 138 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 ANKRD37Q7Z713 158 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 TMEM256Q8N2U0 113 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 RNASE8Q8TDE3 154 aaKnown RBP13.41□□□□□ -0.26
CHFR-213ENST00000536843 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 RNF115Q9Y4L5 304 aa13.41□□□□□ -0.26
CHFR-213ENST00000536843 CEP192Q8TEP8 1941 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 TIAF1O95411 115 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 HLA-HP01893 362 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 AADACP22760 399 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 KCNMB1Q16558 191 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 SLC25A24Q6NUK1 477 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
CHFR-213ENST00000536843 ZNF286AQ9HBT8 521 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 RER1O15258 196 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 LILRA1O75019 489 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 TCN2P20062 427 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 CDKN1BP46527 198 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 BPIFB3P59826 476 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 SELENOTP62341 195 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
CHFR-213ENST00000536843 MEF2BQ02080 365 aaPredicted RBP13.4□□□□□ -0.26
CHFR-213ENST00000536843 RTP5Q14D33 572 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 CLEC12BQ2HXU8 276 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 RHBDD2Q6NTF9 364 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 UEVLDQ8IX04 471 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 CLDN23Q96B33 292 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 RSG1Q9BU20 258 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 ZNF581Q9P0T4 197 aa13.4□□□□□ -0.26
CHFR-213ENST00000536843 UBE2J1Q9Y385 318 aaPredicted RBP13.4□□□□□ -0.26
CHFR-213ENST00000536843 ZNF737O75373 536 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 DHRS3O75911 302 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 CHRNB4P30926 498 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 MDH2P40926 338 aaKnown RBP13.39□□□□□ -0.27
CHFR-213ENST00000536843 BATFQ16520 125 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 KCNIP4Q6PIL6 250 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 PLK3Q9H4B4 646 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 ADAMTS9Q9P2N4 1935 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 C5orf63A6NC05 138 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 K7ESF4 209 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 NUPR1O60356 82 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 PPYP01298 95 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 FAHP16930 419 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 CTSSP25774 331 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 UCP1P25874 307 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 EPHA8P29322 1005 aaPredicted RBP13.39□□□□□ -0.27
CHFR-213ENST00000536843 SERF2P84101 59 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 TDRG1Q3Y452 100 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 PIGTQ969N2 578 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 DDIT4LQ96D03 193 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 PGAM5Q96HS1 289 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 SLC35E1Q96K37 410 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 OR51B6Q9H340 312 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 B3GAT1Q9P2W7 334 aa13.39□□□□□ -0.27
CHFR-213ENST00000536843 A0A1W2PNV4 684 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 ANKUB1A6NFN9 424 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 VDAC1P21796 283 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 TFPI2P48307 235 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 LEMD1Q68G75 181 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 Q6ZSR3 168 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 RABEPKQ7Z6M1 372 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 TBC1D26Q86UD7 250 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 SCGB1C1Q8TD33 95 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 TMEM234Q8WY98 164 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 BTF3L4Q96K17 158 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 OR6C1Q96RD1 312 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 PXMP4Q9Y6I8 212 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 IGLV3-12A0A075B6K2 115 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 C20orf202A1L168 122 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 TDGF1P13385 188 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 CDAP32320 146 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 CXCL12P48061 93 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 TMEM41BQ5BJD5 291 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 GUSBP11Q6P575 273 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 RPUSD4Q96CM3 377 aaKnown RBP13.38□□□□□ -0.27
CHFR-213ENST00000536843 PARLQ9H300 379 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 FOXJ2Q9P0K8 574 aa13.38□□□□□ -0.27
CHFR-213ENST00000536843 CCDC163A0A0D9SF12 145 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 TRBV11-1A0A0K0K1C0 115 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 K7EP13 123 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 IL3RAP26951 378 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 GNRHRP30968 328 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 C17orf67Q0P5P2 114 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 OR8B8Q15620 311 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 Q6ZWC4 215 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 CPEB3Q8NE35 698 aaKnown RBP13.37□□□□□ -0.27
CHFR-213ENST00000536843 DYRK2Q92630 601 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 IL22RA2Q969J5 263 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
CHFR-213ENST00000536843 VAMP8Q9BV40 100 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms