RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MLNRO43193 412 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 CECR9P0C854 216 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 NFYBP25208 207 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 SNCAP37840 140 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 HLA-DRB3P79483 266 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 RTP5Q14D33 572 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF324BQ6AW86 544 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-202ENST00000535906 Q8IYB0 196 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 C11orf1Q9H5F2 150 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 MLXQ9UH92 298 aa11.32□□□□□ -0.6
VPS33B-202ENST00000535906 TNFSF12O43508 249 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 NXPH2O95156 264 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 CGAP01215 116 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 RAB5CP51148 216 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 HOXA4Q00056 320 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 MIDNQ504T8 468 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF695Q8IW36 515 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 OR10J5Q8NHC4 309 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 LILRB1Q8NHL6 650 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 IL1F10Q8WWZ1 152 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 OBP2BQ9NPH6 170 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF71Q9NQZ8 489 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 FZR1Q9UM11 496 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 CEP250Q9BV73 2442 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF146Q15072 292 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF497Q6ZNH5 498 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 SELENOHQ8IZQ5 122 aaKnown RBP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 OR10Z1Q8NGY1 313 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 SPIN2AQ99865 258 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 CACFD1Q9UGQ2 172 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 ERRFI1Q9UJM3 462 aaPredicted RBP11.31□□□□□ -0.6
VPS33B-202ENST00000535906 OR2W1Q9Y3N9 320 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 KPTNQ9Y664 436 aa11.31□□□□□ -0.6
VPS33B-202ENST00000535906 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 NKX2-1P43699 371 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 CAMLGP49069 296 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 HMGN3Q15651 99 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF826PQ6ZT77 177 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 H1FOOQ8IZA3 346 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 PRR18Q8N4B5 295 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 OR2C3Q8N628 320 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 AKR1E2Q96JD6 320 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 SH3BGRL3Q9H299 93 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 TREM2Q9NZC2 230 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 PROCRQ9UNN8 238 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 KIAA2026Q5HYC2 2103 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 HEATR1Q9H583 2144 aaKnown RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
VPS33B-202ENST00000535906 C11orf53Q8IXP5 236 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 UBALD1Q8TB05 177 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 ABHD14BQ96IU4 210 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 SCRT1Q9BWW7 348 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 C19orf12Q9NSK7 152 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 MUC6Q6W4X9 2439 aa11.3□□□□□ -0.6
VPS33B-202ENST00000535906 CLEC18AA5D8T8 446 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 K7EM74 188 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 SH2D1BO14796 132 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 IGLV1-44P01699 117 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 UCP1P25874 307 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MDH2P40926 338 aaKnown RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 FHITP49789 147 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 FABP6P51161 128 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 PEA15Q15121 130 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 GUK1Q16774 197 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 Q6ZR03 302 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 HSD17B11Q8NBQ5 300 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 CLEC18CQ8NCF0 446 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 ATMQ13315 3056 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 DCHS1Q96JQ0 3298 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 IGHV1-18A0A0C4DH31 117 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 WNT9BO14905 357 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 PRH1P02810 166 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 LMO1P25800 156 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 PPT1P50897 306 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 ZNF266Q14584 549 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 RPRMLQ8N4K4 120 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
VPS33B-202ENST00000535906 KLF2Q9Y5W3 355 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-202ENST00000535906 IGHV2OR16-5A0A0B4J2B6 119 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms